WormBase Tree Display for Gene: WBGene00009398

WBGene00009398 SMap: S_parent: Sequence: F35C5
  Identity: Version: 2
    Name: CGC_name: nspb-11 Person_evidence: WBPerson655
      Sequence_name: F35C5.10
      Molecular_name: F35C5.10
        F35C5.10.1
        CE15951
      Other_name: CELE_F35C5.10 Accession_evidence: NDB BX284602
      Public_name: nspb-11
    DB_info: Database: AceView gene 2N197
        WormQTL gene WBGene00009398
        WormFlux gene WBGene00009398
        NDB locus_tag CELE_F35C5.10
        Panther gene CAEEL|WormBase=WBGene00009398|UniProtKB=O45446
          family PTHR34601
        NCBI gene 185265
        RefSeq protein NM_064346.2
        TREEFAM TREEFAM_ID TF319416
        TrEMBL UniProtAcc O45446
        UniProt_GCRP UniProtAcc O45446
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 06 May 2005 10:44:15 WBPerson2970 Name_change: CGC_name: nspb-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspb
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog (91)
    Paralog: WBGene00007243 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00007246 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00007250 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007251 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017305 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in MC neuron; interfacial epithelial cell; rectal gland cell; and touch receptor neurons based on single-cell RNA-seq studies. Is affected by several genes including hyl-2; nuo-6; and ztf-11 based on tiling array; microarray; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; rotenone; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1459) and Protein of unknown function DUF1459. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: F35C5.10
    Corresponding_transcript: F35C5.10.1
    Other_sequence: CSC01202_1
      FD514065.1
      CSC00603_1
      FD516668.1
    Associated_feature: WBsf644777
      WBsf222308
  Experimental_info: RNAi_result: WBRNAi00031754 Inferred_automatically: RNAi_primary
      WBRNAi00014301 Inferred_automatically: RNAi_primary
      WBRNAi00046295 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015867
      Expr1034115
      Expr1150185
      Expr2014453
      Expr2032694
    Drives_construct: WBCnstr00032219
    Construct_product: WBCnstr00032219
    Microarray_results (15)
    Expression_cluster (150)
    Interaction (12)
  Map_info: Map: II Position: 12.4706 Error: 0.009434
    Positive: Positive_clone: F35C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene