WormBase Tree Display for Gene: WBGene00009396
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WBGene00009396 | SMap | S_parent | Sequence | F35C5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-65 | Person_evidence | WBPerson261 | |||||
WBPerson655 | |||||||||
Sequence_name | F35C5.8 | ||||||||
Molecular_name | F35C5.8 | ||||||||
F35C5.8.1 | |||||||||
CE15949 | |||||||||
Other_name | CELE_F35C5.8 | Accession_evidence | NDB | BX284602 | |||||
Public_name | clec-65 | ||||||||
DB_info | Database | AceView | gene | 2N193 | |||||
WormQTL | gene | WBGene00009396 | |||||||
WormFlux | gene | WBGene00009396 | |||||||
NDB | locus_tag | CELE_F35C5.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009396|UniProtKB=O45443 | |||||||
family | PTHR31024 | ||||||||
NCBI | gene | 174928 | |||||||
RefSeq | protein | NM_064344.7 | |||||||
TREEFAM | TREEFAM_ID | TF317104 | |||||||
TrEMBL | UniProtAcc | O45443 | |||||||
UniProt_GCRP | UniProtAcc | O45443 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-65 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (89) | |||||||||
Strain | WBStrain00032494 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (46) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Expressed in intestine. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; von Willebrand factor type A domain; von Willebrand factor, type A; von Willebrand factor A-like domain superfamily; C-type lectin fold; C-type lectin-like; and Lectin C-type domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F35C5.8 | |||||||
Corresponding_transcript | F35C5.8.1 | ||||||||
Associated_feature | WBsf644775 | ||||||||
WBsf222305 | |||||||||
Experimental_info | RNAi_result | WBRNAi00089346 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089365 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089344 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090591 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014306 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046306 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075827 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1007 | ||||||||
Expr1015259 | |||||||||
Expr1150194 | |||||||||
Expr2010198 | |||||||||
Expr2028439 | |||||||||
Drives_construct | WBCnstr00032221 | ||||||||
Construct_product | WBCnstr00032221 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (275) | |||||||||
Interaction (174) | |||||||||
Map_info | Map | II | Position | 12.4149 | Error | 0.018746 | |||
Positive | Positive_clone | F35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005382 | ||||||||
WBPaper00031686 | |||||||||
WBPaper00031865 | |||||||||
WBPaper00037541 | |||||||||
WBPaper00058665 | |||||||||
WBPaper00061178 | |||||||||
WBPaper00065625 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |