WormBase Tree Display for Gene: WBGene00008838
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WBGene00008838 | SMap | S_parent | Sequence | F15A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F15A4.2 | |||||||
Molecular_name | F15A4.2 | ||||||||
F15A4.2.1 | |||||||||
CE15839 | |||||||||
Other_name | CELE_F15A4.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F15A4.2 | ||||||||
DB_info | Database | AceView | gene | 2M755 | |||||
WormQTL | gene | WBGene00008838 | |||||||
WormFlux | gene | WBGene00008838 | |||||||
NDB | locus_tag | CELE_F15A4.2 | |||||||
NCBI | gene | 184511 | |||||||
RefSeq | protein | NM_064253.5 | |||||||
TREEFAM | TREEFAM_ID | TF322394 | |||||||
TrEMBL | UniProtAcc | O17817 | |||||||
UniProt_GCRP | UniProtAcc | O17817 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (51) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | chrII_pilon.g6174 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog (11) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABalaaaala; RMED; amphid neurons; germ line; and oocyte based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including swsn-1; etr-1; and rsr-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; mianserin; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box associated and F-box domain. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F15A4.2 | |||||||
Corresponding_transcript | F15A4.2.1 | ||||||||
Associated_feature | WBsf644755 | ||||||||
WBsf222269 | |||||||||
WBsf222270 | |||||||||
Experimental_info | RNAi_result | WBRNAi00061623 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030984 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013341 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044678 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021838 | ||||||||
Expr1033852 | |||||||||
Expr1148651 | |||||||||
Expr2002606 | |||||||||
Expr2020823 | |||||||||
Drives_construct | WBCnstr00032644 | ||||||||
Construct_product | WBCnstr00032644 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (177) | |||||||||
Interaction (47) | |||||||||
Map_info | Positive | Positive_clone | F15A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 10.0473 | |||||||
Reference | WBPaper00012854 | ||||||||
Method | Gene |