WormBase Tree Display for Gene: WBGene00008441
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WBGene00008441 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | usp-50 | Paper_evidence | WBPaper00048833 | |||||
Person_evidence | WBPerson170 | ||||||||
Sequence_name | E01B7.1 | ||||||||
Molecular_name | E01B7.1 | ||||||||
E01B7.1.1 | |||||||||
CE42799 | |||||||||
E01B7.1.2 | |||||||||
Other_name | phi-33 | Person_evidence | WBPerson2582 | ||||||
Y59A8B.a | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y59A8B.b | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_E01B7.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | usp-50 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2016 15:29:00 | WBPerson2970 | Name_change | CGC_name | usp-50 | ||||
3 | 19 Jun 2008 15:24:43 | WBPerson4025 | Event | Acquires_merge | WBGene00013342 | ||||
Acquires_merge | WBGene00013342 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | usp | ||||||||
Allele (263) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00009744 | ||||||||
00009745 | |||||||||
00009746 | |||||||||
00111107 | |||||||||
00111108 | |||||||||
Ortholog (38) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Predicted to enable cysteine-type deubiquitinase activity. Predicted to be located in early endosome. Human ortholog(s) of this gene implicated in ACTH-secreting pituitary adenoma. Is an ortholog of human USP8 (ubiquitin specific peptidase 8). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:7004 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12631) | ||||
Molecular_info | Corresponding_CDS | E01B7.1 | |||||||
Corresponding_CDS_history | E01B7.1:wp192 | ||||||||
Corresponding_transcript | E01B7.1.1 | ||||||||
E01B7.1.2 | |||||||||
Other_sequence (21) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00094699 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030450 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064998 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001621 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043564 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008585 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037623 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064419 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024976 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057749 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011935 | ||||||||
Expr1033670 | |||||||||
Expr1147557 | |||||||||
Expr2017940 | |||||||||
Expr2036076 | |||||||||
Microarray_results (31) | |||||||||
Expression_cluster (83) | |||||||||
Interaction (51) | |||||||||
Map_info | Map | V | Position | 13.3313 | |||||
Positive | Positive_clone | E01B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00048833 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061750 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |