WormBase Tree Display for Gene: WBGene00008296
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WBGene00008296 | SMap | S_parent | Sequence | C54D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cdr-2 | Paper_evidence | WBPaper00024695 | |||||
Sequence_name | C54D10.1 | ||||||||
Molecular_name | C54D10.1 | ||||||||
C54D10.1.1 | |||||||||
CE05497 | |||||||||
Other_name | CELE_C54D10.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cdr-2 | ||||||||
DB_info | Database | AceView | gene | 5M894 | |||||
WormQTL | gene | WBGene00008296 | |||||||
WormFlux | gene | WBGene00008296 | |||||||
NDB | locus_tag | CELE_C54D10.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008296|UniProtKB=G5ECX9 | |||||||
family | PTHR12289 | ||||||||
NCBI | gene | 183779 | |||||||
RefSeq | protein | NM_073713.5 | |||||||
TREEFAM | TREEFAM_ID | TF314915 | |||||||
TrEMBL | UniProtAcc | G5ECX9 | |||||||
UniProt_GCRP | UniProtAcc | G5ECX9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 23 Mar 2005 15:05:15 | WBPerson2970 | Name_change | CGC_name | cdr-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cdr | ||||||||
Allele (37) | |||||||||
Strain | WBStrain00032317 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00012016 | ||||||||
00012017 | |||||||||
00012018 | |||||||||
00012019 | |||||||||
00012020 | |||||||||
Ortholog (56) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | cdr-2 encodes a predicted transmembrane protein that is a member of the CDR (cadmium responsive) family of proteins; cdr-2 expression is increased upon exposure to cadmium ions, and loss of cdr-2 activity results in increased sensitivity to cadmium. | Paper_evidence | WBPaper00024695 | |||||
WBPaper00039992 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 15 Apr 2014 00:00:00 | ||||||||
Automated_description | Involved in regulation of protein deneddylation and stress response to cadmium ion. Predicted to be located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C54D10.1 | |||||||
Corresponding_transcript | C54D10.1.1 | ||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf653219 | ||||||||
WBsf982015 | |||||||||
WBsf234677 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012379 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043133 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5584 | ||||||||
Expr1010950 | |||||||||
Expr1147102 | |||||||||
Expr2009822 | |||||||||
Expr2028063 | |||||||||
Drives_construct | WBCnstr00003913 | ||||||||
WBCnstr00033076 | |||||||||
Construct_product | WBCnstr00033076 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (333) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | V | Position | 4.17004 | Error | 0.006923 | |||
Positive | Positive_clone | C54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024695 | ||||||||
WBPaper00026592 | |||||||||
WBPaper00033469 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00044578 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00058665 | |||||||||
WBPaper00064370 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |