WormBase Tree Display for Gene: WBGene00008034
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| WBGene00008034 | SMap | S_parent | Sequence | C39E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | prcc-1 | |||||||
| Sequence_name | C39E9.11 | ||||||||
| Molecular_name | C39E9.11 | ||||||||
| C39E9.11.1 | |||||||||
| CE20559 | |||||||||
| Other_name | CELE_C39E9.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | prcc-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 13 Mar 2019 16:42:14 | WBPerson1983 | Name_change | CGC_name | prcc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prcc | ||||||||
| Allele (48) | |||||||||
| Strain | WBStrain00051181 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063836 | ||||||||
| Ortholog (28) | |||||||||
| Structured_description | Concise_description | C39E9.11 is orthologous to the human gene PAPILLARY RENAL CELL CARCINOMA (TRANSLOCATION-ASSOCIATED) (PRCC; OMIM:179755), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in papillary renal cell carcinoma. Is an ortholog of human PRCC (proline rich mitotic checkpoint control factor). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9343) | ||||
| Molecular_info | Corresponding_CDS | C39E9.11 | |||||||
| Corresponding_transcript | C39E9.11.1 | ||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf652324 | ||||||||
| WBsf231084 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042216 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000619 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011786 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117922 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029686 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027217 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024782 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021845 | ||||||||
| Expr1033492 | |||||||||
| Expr1146207 | |||||||||
| Expr2001539 | |||||||||
| Expr2019760 | |||||||||
| Drives_construct | WBCnstr00033289 | ||||||||
| Construct_product | WBCnstr00033289 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | IV | Position | 7.84026 | |||||
| Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00066610 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
