WormBase Tree Display for Gene: WBGene00007888
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| WBGene00007888 | SMap | S_parent | Sequence | C33A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-9 | |||||||
| Sequence_name | C33A12.15 | ||||||||
| Molecular_name | C33A12.15 | ||||||||
| C33A12.15.1 | |||||||||
| CE49759 | |||||||||
| Other_name | CELE_C33A12.15 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttr-9 | ||||||||
| DB_info | Database | AceView | gene | 4K268 | |||||
| WormQTL | gene | WBGene00007888 | |||||||
| WormFlux | gene | WBGene00007888 | |||||||
| NDB | locus_tag | CELE_C33A12.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007888|UniProtKB=O17635 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 183147 | |||||||
| RefSeq | protein | NM_069282.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | O17635 | |||||||
| UniProt_GCRP | UniProtAcc | O17635 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar01855911 | |||||||||
| WBVar00932323 | |||||||||
| WBVar01730437 | |||||||||
| WBVar00432288 | |||||||||
| WBVar00432289 | |||||||||
| WBVar00432290 | |||||||||
| WBVar00191461 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028610 | ||||||||
| 00110653 | |||||||||
| Ortholog (18) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33A12.15 | |||||||
| Corresponding_CDS_history | C33A12.15:wp109 | ||||||||
| C33A12.15:wp243 | |||||||||
| Corresponding_transcript | C33A12.15.1 | ||||||||
| Associated_feature | WBsf230575 | ||||||||
| WBsf230576 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041727 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011505 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029447 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026211 | ||||||||
| Expr1145745 | |||||||||
| Expr2017627 | |||||||||
| Expr2035767 | |||||||||
| Drives_construct | WBCnstr00033406 | ||||||||
| Construct_product | WBCnstr00033406 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (100) | |||||||||
| Map_info | Map | IV | Position | 4.28486 | Error | 0.000587 | |||
| Positive | Positive_clone | C33A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
