WormBase Tree Display for Gene: WBGene00007860
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| WBGene00007860 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rilp-1 | Paper_evidence | WBPaper00037907 | |||||
| Person_evidence | WBPerson3569 | ||||||||
| Sequence_name | C32A3.3 | ||||||||
| Molecular_name | C32A3.3a | ||||||||
| C32A3.3a.1 | |||||||||
| CE33977 | |||||||||
| C32A3.3b | |||||||||
| CE33978 | |||||||||
| C32A3.3a.2 | |||||||||
| C32A3.3b.1 | |||||||||
| Other_name | CELE_C32A3.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rilp-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Jan 2011 10:01:10 | WBPerson2970 | Name_change | CGC_name | rilp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rilp | ||||||||
| Allele (180) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable dynein light intermediate chain binding activity and small GTPase binding activity. Predicted to be involved in cilium assembly. Predicted to be located in ciliary basal body and cytoplasm. Human ortholog(s) of this gene implicated in oculopharyngodistal myopathy 4. Is an ortholog of human RILPL1 (Rab interacting lysosomal protein like 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081300 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26814) | ||||
| Molecular_info | Corresponding_CDS | C32A3.3a | |||||||
| C32A3.3b | |||||||||
| Corresponding_CDS_history | C32A3.3:wp82 | ||||||||
| C32A3.3a:wp88 | |||||||||
| C32A3.3a:wp100 | |||||||||
| C32A3.3b:wp100 | |||||||||
| Corresponding_transcript | C32A3.3a.1 | ||||||||
| C32A3.3a.2 | |||||||||
| C32A3.3b.1 | |||||||||
| Other_sequence (56) | |||||||||
| Associated_feature | WBsf645033 | ||||||||
| WBsf717881 | |||||||||
| WBsf991847 | |||||||||
| WBsf991848 | |||||||||
| WBsf991849 | |||||||||
| WBsf991850 | |||||||||
| WBsf1014608 | |||||||||
| WBsf1014609 | |||||||||
| WBsf224632 | |||||||||
| WBsf224633 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011455 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068061 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041640 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108796 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006152 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033549 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062138 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026526 | ||||||||
| Expr1033407 | |||||||||
| Expr1145665 | |||||||||
| Expr2015358 | |||||||||
| Expr2033592 | |||||||||
| Drives_construct | WBCnstr00033431 | ||||||||
| Construct_product | WBCnstr00033431 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000007515 | ||||||||
| WBInteraction000182647 | |||||||||
| WBInteraction000543832 | |||||||||
| Map_info | Map | III | Position | -5.10632 | Error | 0.011122 | |||
| Positive | Positive_clone | C32A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030887 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038586 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060994 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
