WormBase Tree Display for Gene: WBGene00007674
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WBGene00007674 | SMap | S_parent | Sequence | C18D4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | C18D4.4 | |||||||
Molecular_name | C18D4.4a | ||||||||
C18D4.4a.1 | |||||||||
CE47715 | |||||||||
C18D4.4b | |||||||||
CE47725 | |||||||||
C18D4.4c | |||||||||
CE47733 | |||||||||
C18D4.4b.1 | |||||||||
C18D4.4c.1 | |||||||||
Other_name | CELE_C18D4.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | C18D4.4 | ||||||||
DB_info | Database | AceView | gene | 5S8 | |||||
WormQTL | gene | WBGene00007674 | |||||||
WormFlux | gene | WBGene00007674 | |||||||
NDB | locus_tag | CELE_C18D4.4 | |||||||
NCBI | gene | 182784 | |||||||
RefSeq | protein | NM_001276986.3 | |||||||
NM_001269816.4 | |||||||||
NM_001269817.2 | |||||||||
TrEMBL | UniProtAcc | I7LFH4 | |||||||
I7K4P7 | |||||||||
O45262 | |||||||||
UniProt_GCRP | UniProtAcc | I7LFH4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 18 May 2012 15:41:39 | WBPerson4025 | Event | Split_into | WBGene00219493 | ||||
Split_into | WBGene00219493 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (51) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | CSP31.g13822 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | |||||
CSP31.g18816 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g18817 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g18819 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g18820 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g3178 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (17) | |||||||||
Structured_description | Automated_description | Enriched in cephalic sheath cell; excretory cell; and neurons based on tiling array and RNA-seq studies. Is affected by several genes including qui-1; etr-1; and rsd-2 based on microarray and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and rifampin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Vitelline membrane outer layer protein I (VOMI) superfamily and Vitelline membrane outer layer protein I (VOMI). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C18D4.4a | |||||||
C18D4.4b | |||||||||
C18D4.4c | |||||||||
Corresponding_CDS_history | C18D4.4a:wp232 | ||||||||
C18D4.4b:wp232 | |||||||||
Corresponding_transcript | C18D4.4a.1 | ||||||||
C18D4.4b.1 | |||||||||
C18D4.4c.1 | |||||||||
Associated_feature | WBsf653514 | ||||||||
Experimental_info | RNAi_result | WBRNAi00040930 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029073 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011002 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018947 | ||||||||
Expr1144977 | |||||||||
Drives_construct | WBCnstr00033562 | ||||||||
Construct_product | WBCnstr00033562 | ||||||||
Microarray_results | SMD_C18D4.4 | ||||||||
179503_at | |||||||||
Aff_C18D4.4 | |||||||||
GPL14144_C18D4.4_154-213_0.950_1_A | |||||||||
GPL19516_CGZ0005387 | |||||||||
GPL19516_CGZ0005388 | |||||||||
GPL21109_C18D4.4a | |||||||||
GPL21109_C18D4.4b | |||||||||
GPL8673_C18D4_4P00103 | |||||||||
GPL8673_C18D4_4P00157 | |||||||||
Expression_cluster (71) | |||||||||
Interaction (14) | |||||||||
Map_info | Positive | Positive_clone | C18D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 12.9178 | |||||||
Method | Gene |