WormBase Tree Display for Gene: WBGene00007645
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| WBGene00007645 | SMap | S_parent | Sequence | C17E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | vps-72 | Person_evidence | WBPerson724 | |||||
| Sequence_name | C17E4.6 | ||||||||
| Molecular_name | C17E4.6 | ||||||||
| C17E4.6.1 | |||||||||
| CE25780 | |||||||||
| Other_name | CELE_C17E4.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | vps-72 | ||||||||
| DB_info | Database | AceView | gene | 1K7 | |||||
| WormQTL | gene | WBGene00007645 | |||||||
| WormFlux | gene | WBGene00007645 | |||||||
| NDB | locus_tag | CELE_C17E4.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007645|UniProtKB=Q93230 | |||||||
| family | PTHR13275 | ||||||||
| NCBI | gene | 172769 | |||||||
| RefSeq | protein | NM_060104.6 | |||||||
| TREEFAM | TREEFAM_ID | TF314532 | |||||||
| TrEMBL | UniProtAcc | Q93230 | |||||||
| UniProt_GCRP | UniProtAcc | Q93230 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Oct 2024 23:24:44 | WBPerson51134 | Name_change | CGC_name | vps-72 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vps | ||||||||
| Allele (104) | |||||||||
| Strain | WBStrain00036752 | ||||||||
| WBStrain00036872 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088692 | ||||||||
| Contained_in_operon | CEOP1544 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to be located in nucleus. Is an ortholog of human VPS72 (vacuolar protein sorting 72 homolog). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17E4.6 | |||||||
| Corresponding_CDS_history | C17E4.6:wp20 | ||||||||
| Corresponding_transcript | C17E4.6.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature (28) | |||||||||
| Transcription_factor | WBTranscriptionFactor000766 | ||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1014337 | ||||||||
| Expr1033303 | |||||||||
| Expr1144843 | |||||||||
| Expr2000909 | |||||||||
| Expr2019130 | |||||||||
| Construct_product | WBCnstr00017347 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (53) | |||||||||
| Map_info | Map | I | Position | 3.76104 | |||||
| Positive | Positive_clone | C17E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027634 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
