WormBase Tree Display for Gene: WBGene00007630
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| WBGene00007630 | SMap | S_parent | Sequence | C16C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | har-1 | Person_evidence | WBPerson32 | |||||
| Sequence_name | C16C10.11 | ||||||||
| Molecular_name | C16C10.11 | ||||||||
| C16C10.11.1 | |||||||||
| CE01491 | |||||||||
| Other_name | CELE_C16C10.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | har-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Apr 2008 14:21:37 | WBPerson2970 | Name_change | CGC_name | har-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | har | ||||||||
| Allele | WBVar00603950 | Inferred_automatically | From strain object: DA2155 | ||||||
| WBVar00604126 | Inferred_automatically | From strain object: VC3169 | |||||||
| WBVar00820173 | |||||||||
| WBVar00820174 | |||||||||
| WBVar00820175 | |||||||||
| WBVar00820176 | |||||||||
| WBVar00820177 | |||||||||
| WBVar00275860 | |||||||||
| WBVar01445208 | |||||||||
| WBVar01445209 | |||||||||
| Strain | WBStrain00003014 | ||||||||
| WBStrain00037706 | |||||||||
| WBStrain00005596 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050453 | ||||||||
| 00050454 | |||||||||
| 00050455 | |||||||||
| 00050456 | |||||||||
| 00050457 | |||||||||
| 00050458 | |||||||||
| 00050459 | |||||||||
| 00050460 | |||||||||
| 00050461 | |||||||||
| Contained_in_operon | CEOP3152 | ||||||||
| Ortholog (43) | |||||||||
| Structured_description | Automated_description | Involved in mitochondrion organization. Acts upstream of with a positive effect on determination of adult lifespan. Located in mitochondrion and striated muscle dense body. Expressed in intestine and ventral nerve cord. Human ortholog(s) of this gene implicated in isolated mitochondrial myopathy and neurodegenerative disease (multiple). Is an ortholog of human CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060214 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15559) | ||||
| DOID:0081356 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15559) | ||||||
| DOID:0080504 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21645) | ||||||
| DOID:0081357 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15559) | ||||||
| Molecular_info | Corresponding_CDS | C16C10.11 | |||||||
| Corresponding_transcript | C16C10.11.1 | ||||||||
| Other_sequence (142) | |||||||||
| Associated_feature | WBsf645062 | ||||||||
| WBsf658793 | |||||||||
| WBsf992046 | |||||||||
| WBsf992047 | |||||||||
| WBsf992048 | |||||||||
| WBsf1014716 | |||||||||
| WBsf1014717 | |||||||||
| WBsf1014718 | |||||||||
| WBsf224686 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Chronogram802 | ||||||||
| Expr5278 | |||||||||
| Expr9374 | |||||||||
| Expr1013371 | |||||||||
| Expr1033295 | |||||||||
| Expr1144721 | |||||||||
| Expr2012368 | |||||||||
| Expr2030604 | |||||||||
| Drives_construct | WBCnstr00003514 | ||||||||
| WBCnstr00033593 | |||||||||
| Construct_product | WBCnstr00013939 | ||||||||
| WBCnstr00033593 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (136) | |||||||||
| Map_info | Map | III | Position | -3.77914 | Error | 0.001505 | |||
| Positive | Positive_clone | C16C10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035659 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
