WormBase Tree Display for Gene: WBGene00007313
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| WBGene00007313 | SMap | S_parent | Sequence | C04H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-147 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | C04H5.2 | ||||||||
| Molecular_name | C04H5.2 | ||||||||
| C04H5.2.1 | |||||||||
| CE15588 | |||||||||
| Other_name | CELE_C04H5.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-147 | ||||||||
| DB_info | Database | AceView | gene | 2O822 | |||||
| WormQTL | gene | WBGene00007313 | |||||||
| WormFlux | gene | WBGene00007313 | |||||||
| NDB | locus_tag | CELE_C04H5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007313|UniProtKB=O62025 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 175114 | |||||||
| RefSeq | protein | NM_064621.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315532 | |||||||
| TrEMBL | UniProtAcc | O62025 | |||||||
| UniProt_GCRP | UniProtAcc | O62025 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-147 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (55) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog (118) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; male distal tip cell; neurons; retrovesicular ganglion; and spermatheca based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and rsr-2 based on tiling array; RNA-seq; and microarray studies. Is affected by thirteen chemicals including methylmercuric chloride; rotenone; and rifampin based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin fold; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C04H5.2 | |||||||
| Corresponding_transcript | C04H5.2.1 | ||||||||
| Other_sequence | CJC08058_1 | ||||||||
| Associated_feature | WBsf666385 | ||||||||
| WBsf990734 | |||||||||
| WBsf990735 | |||||||||
| WBsf1013854 | |||||||||
| WBsf224290 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010161 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002052 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039675 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028467 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028136 | ||||||||
| Expr1143771 | |||||||||
| Expr2010076 | |||||||||
| Expr2028318 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (148) | |||||||||
| Map_info | Map | II | Position | 23.0921 | Error | 0.006282 | |||
| Positive | Positive_clone | C04H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064552 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
