WormBase Tree Display for Gene: WBGene00007308
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WBGene00007308 | SMap | S_parent | Sequence | C04G2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nsph-3.2 | Person_evidence | WBPerson18244 | |||||
Sequence_name | C04G2.9 | ||||||||
Molecular_name | C04G2.9 | ||||||||
C04G2.9.1 | |||||||||
CE40544 | |||||||||
Other_name | CELE_C04G2.9 | Accession_evidence | NDB | BX284604 | |||||
Public_name | nsph-3.2 | ||||||||
DB_info | Database | AceView | gene | 4K879 | |||||
WormQTL | gene | WBGene00007308 | |||||||
WormFlux | gene | WBGene00007308 | |||||||
NDB | locus_tag | CELE_C04G2.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007308|UniProtKB=Q17633 | |||||||
family | PTHR31578 | ||||||||
NCBI | gene | 177878 | |||||||
RefSeq | protein | NM_069437.7 | |||||||
TREEFAM | TREEFAM_ID | TF316764 | |||||||
TrEMBL | UniProtAcc | Q17633 | |||||||
UniProt_GCRP | UniProtAcc | Q17633 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 10 Jul 2021 01:15:58 | WBPerson1983 | Name_change | CGC_name | nsph-3.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nsph | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (57) | |||||||||
Paralog | WBGene00016516 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00022763 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WBGene00013474 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00013956 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010682 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00194734 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00043743 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00020202 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABplppaaaap; AVB; amphid sheath cell; germ line; and sperm based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including numr-2; numr-1; and mut-16 based on microarray; proteomic; and RNA-seq studies. Is affected by forty-two chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domain: Cytosolic motility protein. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C04G2.9 | |||||||
Corresponding_CDS_history | C04G2.9:wp167 | ||||||||
Corresponding_transcript | C04G2.9.1 | ||||||||
Other_sequence (73) | |||||||||
Associated_feature | WBsf228933 | ||||||||
Experimental_info | RNAi_result | WBRNAi00039664 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022591 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00007472 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010152 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028461 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025683 | ||||||||
Expr1033149 | |||||||||
Expr1143758 | |||||||||
Expr2000422 | |||||||||
Expr2018645 | |||||||||
Drives_construct | WBCnstr00033840 | ||||||||
WBCnstr00042180 | |||||||||
Construct_product | WBCnstr00033840 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (280) | |||||||||
Interaction (220) | |||||||||
Map_info | Positive | Positive_clone | C04G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.53001 | |||||||
Reference | WBPaper00064502 | ||||||||
Method | Gene |