WormBase Tree Display for Gene: WBGene00007258
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| WBGene00007258 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hasp-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C01H6.9 | ||||||||
| Molecular_name | C01H6.9 | ||||||||
| C01H6.9.1 | |||||||||
| CE42869 | |||||||||
| Other_name | CELE_C01H6.9 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | hasp-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Dec 2014 15:51:18 | WBPerson2970 | Name_change | CGC_name | hasp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hasp | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP1376 | ||||||||
| Ortholog (46) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | hasp-1 encodes a homolog of vertebrate haploid germ cell-specific nuclear protein kinase (haspin); the hasp-1 tm3858 deletion mutation has been classified as lethal or sterile by the National Bioresource Project of Japan; HASP-1 specifically binds GOA-1 in yeast two-hybrid assays; HASP-1 is expressed in PHB sensory neurons and PVT interneurons in the tail, several unidentified neurons in the head (with projections to the nose and nerve ring), and intestinal cells; HASP-1 is paralogous to HASP-2, encoded by Y18H1A.10; in addition, there are two pseudogenes, F22H10.5 and Y40A1A.1, in the C. elegans genome that share sequence similarity to HASP-1 and HASP-2. | Paper_evidence | WBPaper00006194 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 19 Dec 2014 00:00:00 | ||||||||
| Automated_description | Enables G-protein alpha-subunit binding activity and histone H3T3 kinase activity. Predicted to be involved in intracellular signal transduction and mitotic cell cycle. Predicted to be located in cytoplasm and nucleus. Expressed in PHB; PVT; head neurons; intestine; and seam cell. Is an ortholog of human HASPIN (histone H3 associated protein kinase). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01H6.9 | |||||||
| Corresponding_CDS_history | C01H6.9:wp192 | ||||||||
| C01H6.9:wp193 | |||||||||
| Corresponding_transcript | C01H6.9.1 | ||||||||
| Other_sequence | XIC03618_1 | ||||||||
| CRC04477_1 | |||||||||
| CR04112 | |||||||||
| XI02862 | |||||||||
| Associated_feature | WBsf649297 | ||||||||
| WBsf664423 | |||||||||
| WBsf219706 | |||||||||
| WBsf219707 | |||||||||
| WBsf219708 | |||||||||
| WBsf219709 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00063374 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00063373 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063362 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116590 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028323 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063361 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062104 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009956 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039377 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2751 | ||||||||
| Expr1014423 | |||||||||
| Expr1033131 | |||||||||
| Expr1143492 | |||||||||
| Expr2012371 | |||||||||
| Expr2030607 | |||||||||
| Drives_construct | WBCnstr00010931 | ||||||||
| WBCnstr00033879 | |||||||||
| Construct_product | WBCnstr00010931 | ||||||||
| WBCnstr00021071 | |||||||||
| WBCnstr00021072 | |||||||||
| WBCnstr00033879 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction | WBInteraction000031975 | ||||||||
| WBInteraction000542827 | |||||||||
| WBInteraction000582146 | |||||||||
| Map_info | Map | I | Position | 1.85027 | |||||
| Positive | Positive_clone | C01H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051993 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057802 | |||||||||
| WBPaper00063132 | |||||||||
| WBPaper00064160 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
