WormBase Tree Display for Gene: WBGene00006981
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WBGene00006981 | SMap | S_parent | Sequence | C09C7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | zig-4 | Person_evidence | WBPerson260 | |||||
Sequence_name | C09C7.1 | ||||||||
Molecular_name | C09C7.1 | ||||||||
C09C7.1.1 | |||||||||
CE02468 | |||||||||
Other_name | CELE_C09C7.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | zig-4 | ||||||||
DB_info | Database | AceView | gene | XI545 | |||||
WormQTL | gene | WBGene00006981 | |||||||
WormFlux | gene | WBGene00006981 | |||||||
NDB | locus_tag | CELE_C09C7.1 | |||||||
NCBI | gene | 181051 | |||||||
RefSeq | protein | NM_076934.7 | |||||||
SwissProt | UniProtAcc | G5ECB1 | |||||||
TREEFAM | TREEFAM_ID | TF343606 | |||||||
UniProt_GCRP | UniProtAcc | G5ECB1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:44 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | zig | ||||||||
Allele (33) | |||||||||
Strain | WBStrain00029296 | ||||||||
WBStrain00001757 | |||||||||
WBStrain00029286 | |||||||||
WBStrain00035503 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00010748 | ||||||||
00010749 | |||||||||
00010750 | |||||||||
00010751 | |||||||||
Ortholog (35) | |||||||||
Paralog (24) | |||||||||
Structured_description | Concise_description | zig-4 encodes a predicted secreted protein that is a member of the immunoglobulin superfamily of proteins; ZIG-4 activity is required for maintenance of ventral nerve cord organization: the AVKL/R and PVQL/R axons of the left and right ventral nerve cords do not maintain their proper spatial positions and drift into the opposite cord; a zig-4::gfp reporter fusion is expressed in the PVT, ASK, BAG, and M2 neurons, with expression also seen during the L1 stage in pharyngeal mesoderm and ectoderm. | Paper_evidence | WBPaper00005064 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 14 Jan 2008 00:00:00 | ||||||||
Automated_description | Involved in neuron development. Predicted to be located in extracellular region. Expressed in neurons and pharynx. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C09C7.1 | |||||||
Corresponding_transcript | C09C7.1.1 | ||||||||
Other_sequence | FD514513.1 | ||||||||
CJC10066_1 | |||||||||
CRC03657_1 | |||||||||
JI166385.1 | |||||||||
CR07197 | |||||||||
Associated_feature | WBsf648337 | ||||||||
WBsf1023331 | |||||||||
WBsf235993 | |||||||||
Experimental_info | RNAi_result | WBRNAi00000560 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010516 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040171 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram267 | ||||||||
Expr1750 | |||||||||
Expr3881 | |||||||||
Expr5212 | |||||||||
Expr1011484 | |||||||||
Expr1032984 | |||||||||
Expr1144247 | |||||||||
Expr2018143 | |||||||||
Expr2036280 | |||||||||
Drives_construct (11) | |||||||||
Construct_product | WBCnstr00006621 | ||||||||
WBCnstr00006622 | |||||||||
WBCnstr00006631 | |||||||||
WBCnstr00006632 | |||||||||
WBCnstr00034054 | |||||||||
Microarray_results (22) | |||||||||
Expression_cluster (207) | |||||||||
Interaction (15) | |||||||||
Anatomy_function | WBbtf0027 | ||||||||
Map_info | Map | X | Position | -0.996305 | Error | 0.016382 | |||
Positive | Positive_clone | C09C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4178 | |||||||
4766 | |||||||||
Pseudo_map_position | |||||||||
Reference (26) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |