WormBase Tree Display for Gene: WBGene00006863
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| WBGene00006863 | SMap | S_parent | Sequence | F56B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gyg-1 | Person_evidence | WBPerson261 | |||||
| WBPerson71 | |||||||||
| Sequence_name | F56B6.4 | ||||||||
| Molecular_name | F56B6.4a | ||||||||
| F56B6.4a.1 | |||||||||
| CE04664 | |||||||||
| F56B6.4b | |||||||||
| CE29405 | |||||||||
| F56B6.4c | |||||||||
| CE31185 | |||||||||
| F56B6.4b.1 | |||||||||
| F56B6.4c.1 | |||||||||
| Other_name | uvt-5 | Person_evidence | WBPerson71 | ||||||
| CELE_F56B6.4 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gyg-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Sep 2008 15:49:39 | WBPerson2970 | Name_change | CGC_name | gyg-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gyg | ||||||||
| Allele (50) | |||||||||
| Legacy_information | are transcript present in larvae adults. | ||||||||
| [C.elegansII] NMK. Rare 1.2 kb transcript present in larvae, adults. [Heine and Blumenthal 1986] | |||||||||
| Strain | WBStrain00003040 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00012020 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011684 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable glycosyltransferase activity. Predicted to be involved in glycogen biosynthetic process. Located in striated muscle dense body. Expressed in hypodermis. Is an ortholog of human GYG2 (glycogenin 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56B6.4a | |||||||
| F56B6.4b | |||||||||
| F56B6.4c | |||||||||
| Corresponding_transcript | F56B6.4a.1 | ||||||||
| F56B6.4b.1 | |||||||||
| F56B6.4c.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00109811 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032933 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109717 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015786 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048646 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109764 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1273 | ||||||||
| Expr1241 | |||||||||
| Expr6212 | |||||||||
| Expr9389 | |||||||||
| Expr1024607 | |||||||||
| Expr1032908 | |||||||||
| Expr1152408 | |||||||||
| Expr2012350 | |||||||||
| Expr2030586 | |||||||||
| Drives_construct | WBCnstr00002066 | ||||||||
| WBCnstr00003540 | |||||||||
| WBCnstr00037882 | |||||||||
| Construct_product | WBCnstr00013954 | ||||||||
| WBCnstr00037882 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (216) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | X | Position | -10.1749 | |||||
| Positive | Positive_clone | F56B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00000873 | ||||||||
| WBPaper00029075 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045489 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
