WormBase Tree Display for Gene: WBGene00006862
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| WBGene00006862 | SMap | S_parent | Sequence | C42D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pnk-4 | Person_evidence | WBPerson261 | |||||
| WBPerson71 | |||||||||
| WBPerson545 | |||||||||
| Sequence_name | C42D8.3 | ||||||||
| Molecular_name | C42D8.3 | ||||||||
| C42D8.3.1 | |||||||||
| CE04204 | |||||||||
| Other_name | uvt-3 | Person_evidence | WBPerson71 | ||||||
| CELE_C42D8.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | pnk-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Sep 2008 15:49:39 | WBPerson2970 | Name_change | CGC_name | pnk-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pnk | ||||||||
| Allele (83) | |||||||||
| Legacy_information | Transcript present in embryos larvae. | ||||||||
| [C.elegansII] NMK. 2.7 kb transcript present in embryos, larvae. [Heine and Blumenthal 1986] | |||||||||
| Strain | WBStrain00002859 | ||||||||
| WBStrain00032223 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00004068 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable pantothenate kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be located in cytosol and nucleus. Expressed in tail. Human ortholog(s) of this gene implicated in cataract. Is an ortholog of human PANK4 (pantothenate kinase 4 (inactive)). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:83 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19366) | ||||
| Molecular_info | Corresponding_CDS | C42D8.3 | |||||||
| Corresponding_transcript | C42D8.3.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf235671 | ||||||||
| WBsf235672 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029752 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011876 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1239 | ||||||||
| Expr5488 | |||||||||
| Expr1024586 | |||||||||
| Expr1032907 | |||||||||
| Expr1146350 | |||||||||
| Expr2014985 | |||||||||
| Expr2033220 | |||||||||
| Drives_construct | WBCnstr00003381 | ||||||||
| WBCnstr00037883 | |||||||||
| Construct_product | WBCnstr00037883 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction | WBInteraction000038224 | ||||||||
| WBInteraction000045126 | |||||||||
| WBInteraction000045127 | |||||||||
| WBInteraction000046712 | |||||||||
| WBInteraction000046714 | |||||||||
| WBInteraction000049430 | |||||||||
| Map_info | Map | X | Position | -6.19552 | Error | 0.00036 | |||
| Positive | Positive_clone | C42D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00000873 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065394 | |||||||||
| Remark | Map X | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
