WormBase Tree Display for Gene: WBGene00006853
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WBGene00006853 | SMap | S_parent | Sequence | C47G2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | unc-130 | Person_evidence | WBPerson261 | |||||
Sequence_name | C47G2.2 | ||||||||
Molecular_name | C47G2.2 | ||||||||
C47G2.2.1 | |||||||||
CE02166 | |||||||||
Other_name | CELE_C47G2.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | unc-130 | ||||||||
DB_info | Database | AceView | gene | 2L573 | |||||
WormQTL | gene | WBGene00006853 | |||||||
WormFlux | gene | WBGene00006853 | |||||||
NDB | locus_tag | CELE_C47G2.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006853|UniProtKB=Q18694 | |||||||
family | PTHR11829 | ||||||||
NCBI | gene | 174721 | |||||||
RefSeq | protein | NM_064010.5 | |||||||
SwissProt | UniProtAcc | Q18694 | |||||||
UniProt_GCRP | UniProtAcc | Q18694 | |||||||
OMIM | gene | 611539 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Allele (36) | |||||||||
Strain | WBStrain00031123 | ||||||||
WBStrain00040542 | |||||||||
WBStrain00029988 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (27) | |||||||||
Ortholog (60) | |||||||||
Paralog | WBGene00001434 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001438 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001440 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001441 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001442 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00002601 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003017 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003976 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004013 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000912 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | A member of the forkhead domain family of transcription factors that affects the generation of the AWA and ASG chemosensory neurons and is partially required for male tail morphogenesis and embryogenesis; it is expressed in the AWA and ASG precursors; it is required for the graded spatial expression of the UNC-129 TGF-beta guidance factor. | Paper_evidence | WBPaper00004379 | |||||
WBPaper00004380 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity and transcription corepressor activity. Involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis. Located in nucleus. Expressed in several structures, including HO neuron; hypodermis; ray; tail; and ventral body wall muscle. Human ortholog(s) of this gene implicated in glaucoma and vitiligo. Is an ortholog of several human genes including FOXD3 (forkhead box D3); FOXD4 (forkhead box D4); and FOXD4L1 (forkhead box D4 like 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:1686 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3804) | ||||
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3804) | ||||||
Molecular_info | Corresponding_CDS | C47G2.2 | |||||||
Corresponding_transcript | C47G2.2.1 | ||||||||
Other_sequence | Dviv_isotig17565 | ||||||||
CR11553 | |||||||||
Dviv_isotig17564 | |||||||||
CBC08749_1 | |||||||||
CRC07576_1 | |||||||||
CR11552 | |||||||||
JI182349.1 | |||||||||
JI165252.1 | |||||||||
Associated_feature (15) | |||||||||
Gene_product_binds (1114) | |||||||||
Transcription_factor | WBTranscriptionFactor000007 | ||||||||
Experimental_info | RNAi_result | WBRNAi00000983 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042701 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090262 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089792 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029926 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012086 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00090104 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00068017 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113567 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089944 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (16) | |||||||||
Drives_construct | WBCnstr00000479 | ||||||||
WBCnstr00007747 | |||||||||
WBCnstr00014250 | |||||||||
WBCnstr00016521 | |||||||||
WBCnstr00034122 | |||||||||
Construct_product | WBCnstr00007747 | ||||||||
WBCnstr00014834 | |||||||||
WBCnstr00014906 | |||||||||
WBCnstr00015401 | |||||||||
WBCnstr00034122 | |||||||||
Antibody | WBAntibody00000322 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (128) | |||||||||
Interaction (185) | |||||||||
Product_binds_matrix | WBPmat00005569 | ||||||||
Map_info | Map | II | Position | 3.40404 | Error | 0.003003 | |||
Well_ordered | |||||||||
Positive | Positive_clone | C47G2 | Person_evidence | WBPerson2286 | |||||
Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
Mapping_data | Multi_point | 3609 | |||||||
Reference (49) | |||||||||
Method | Gene |