WormBase Tree Display for Gene: WBGene00006824
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WBGene00006824 | Evidence | Paper_evidence | WBPaper00019431 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y105E8A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | unc-95 | Person_evidence | WBPerson261 | |||||
Sequence_name | Y105E8A.6 | ||||||||
Molecular_name | Y105E8A.6 | ||||||||
Y105E8A.6.1 | |||||||||
CE31857 | |||||||||
Other_name | Y105E8E.e | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y105E8A.6 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | unc-95 | ||||||||
DB_info | Database | AceView | gene | 1O974 | |||||
WormQTL | gene | WBGene00006824 | |||||||
WormFlux | gene | WBGene00006824 | |||||||
NDB | locus_tag | CELE_Y105E8A.6 | |||||||
NCBI | gene | 173301 | |||||||
RefSeq | protein | NM_170938.7 | |||||||
SwissProt | UniProtAcc | Q9NEZ5 | |||||||
UniProt_GCRP | UniProtAcc | Q9NEZ5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Allele (65) | |||||||||
Legacy_information | su106sd : very slow or paralysed Egl; abnormal variable muscle birefringence disorganized sarcomeres with collections of thin filaments. ES3. NA4 (su33amber (simialr phenotypes ME0) etc.). | ||||||||
[C.elegansII] su106sd : very slow or paralysed, Egl; abnormal variable muscle birefringence, disorganized sarcomeres with collections of thin filaments. ES3. OA3: su33amb (similar phenotypes, ME0), etc. [Zengel and Epstein 1980; HE] | |||||||||
Strain | WBStrain00035931 | ||||||||
WBStrain00008387 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (18) | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00000438 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00002987 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00002988 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003000 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003167 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00006654 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00015216 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017644 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00022518 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | unc-95 encodes a LIM domain-containing protein related to Drosophila and vertebrate paxillins; UNC-95 is required for locomotion and organization of thick and thin filaments in body wall muscle; by homology, UNC-95 may function as an anchor protein that links signaling and cytoskeletal proteins at focal adhesions; in vitro, UNC-95 interacts with RNF-5, a RING finger protein that may function as an E3 ligase to regulate UNC-95 levels via ubiquitin-mediated degradation; UNC-95 is expressed in body-wall and vulval muscles, and co-localizes with RNF-5 to muscle dense bodies (focal adhesion-like attachment sites). | Paper_evidence | WBPaper00000488 | |||||
WBPaper00013295 | |||||||||
WBPaper00019431 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables protein domain specific binding activity. Located in M band; nucleus; and striated muscle dense body. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y105E8A.6 | |||||||
Corresponding_CDS_history | Y105E8A.6:wp86 | ||||||||
Corresponding_transcript | Y105E8A.6.1 | ||||||||
Other_sequence (34) | |||||||||
Associated_feature | WBsf649756 | ||||||||
WBsf665123 | |||||||||
WBsf979068 | |||||||||
WBsf986146 | |||||||||
WBsf986147 | |||||||||
WBsf1011238 | |||||||||
WBsf220605 | |||||||||
WBsf220606 | |||||||||
WBsf220607 | |||||||||
WBsf220608 | |||||||||
Transcription_factor | WBTranscriptionFactor000438 | ||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr2991 | ||||||||
Expr2992 | |||||||||
Expr8314 | |||||||||
Expr8542 | |||||||||
Expr1012404 | |||||||||
Expr1032888 | |||||||||
Expr1158771 | |||||||||
Expr2017921 | |||||||||
Expr2036057 | |||||||||
Drives_construct | WBCnstr00006034 | ||||||||
WBCnstr00011070 | |||||||||
WBCnstr00011071 | |||||||||
WBCnstr00013356 | |||||||||
WBCnstr00034135 | |||||||||
Construct_product | WBCnstr00006034 | ||||||||
WBCnstr00013356 | |||||||||
WBCnstr00034135 | |||||||||
Regulate_expr_cluster | WBPaper00031097:unc-95(su33)_upregulated | ||||||||
Antibody | WBAntibody00001286 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (158) | |||||||||
Interaction (56) | |||||||||
WBProcess | WBbiopr:00000006 | ||||||||
Map_info | Map | I | Position | 24.674 | Error | 0.00615 | |||
Well_ordered | |||||||||
Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | 2_point | 392 | |||||||
393 | |||||||||
394 | |||||||||
3684 | |||||||||
3685 | |||||||||
7080 | |||||||||
Multi_point | 2332 | ||||||||
4894 | |||||||||
Pos_neg_data | 5109 | ||||||||
5110 | |||||||||
5111 | |||||||||
5112 | |||||||||
5113 | |||||||||
5114 | |||||||||
5115 | |||||||||
Reference (31) | |||||||||
Method | Gene |