WormBase Tree Display for Gene: WBGene00006566
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| WBGene00006566 | SMap | S_parent | Sequence | ZK829 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tgt-1 | |||||||
| Sequence_name | ZK829.6 | ||||||||
| Molecular_name | ZK829.6 | ||||||||
| ZK829.6.1 | |||||||||
| CE52839 | |||||||||
| Other_name | tgt | ||||||||
| CELE_ZK829.6 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | tgt-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tgt | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00032963 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP4484 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00006567 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | tgt-1 encodes a tRNA-guanine transglycosylase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable tRNA-guanosine(34) queuine transglycosylase activity. Predicted to be involved in tRNA-guanine transglycosylation. Predicted to be located in cytoplasm. Is an ortholog of human QTRT1 (queuine tRNA-ribosyltransferase catalytic subunit 1). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK829.6 | |||||||
| Corresponding_CDS_history | ZK829.6:wp268 | ||||||||
| Corresponding_transcript | ZK829.6.1 | ||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf668378 | ||||||||
| WBsf997997 | |||||||||
| WBsf1018300 | |||||||||
| WBsf230940 | |||||||||
| WBsf230941 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038458 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062500 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059752 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022185 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020742 | ||||||||
| Expr1032704 | |||||||||
| Expr1163177 | |||||||||
| Expr2017382 | |||||||||
| Expr2035519 | |||||||||
| Drives_construct | WBCnstr00034299 | ||||||||
| Construct_product | WBCnstr00034299 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | IV | Position | 5.4536 | Error | 0.000486 | |||
| Positive | Positive_clone | ZK829 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065106 | |||||||||
| WBPaper00066195 | |||||||||
| Remark | Remove tgt-1 association with C13B4.2. This appeared inappropriate (Thierry-Mieg D, Hodgkin JA) [021111 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
