WormBase Tree Display for Gene: WBGene00005195
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| WBGene00005195 | SMap | S_parent | Sequence | T19C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-38 | Person_evidence | WBPerson42 | |||||
| Sequence_name | T19C4.8 | ||||||||
| Molecular_name | T19C4.8 | ||||||||
| T19C4.8.1 | |||||||||
| CE33185 | |||||||||
| Other_name | CELE_T19C4.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-38 | ||||||||
| DB_info | Database | AceView | gene | 5L632 | |||||
| WormQTL | gene | WBGene00005195 | |||||||
| WormFlux | gene | WBGene00005195 | |||||||
| NDB | locus_tag | CELE_T19C4.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005195|UniProtKB=Q86GC0 | |||||||
| family | PTHR31552 | ||||||||
| NCBI | gene | 353467 | |||||||
| RefSeq | protein | NM_182428.2 | |||||||
| TREEFAM | TREEFAM_ID | TF352435 | |||||||
| TrEMBL | UniProtAcc | Q86GC0 | |||||||
| UniProt_GCRP | UniProtAcc | Q86GC0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srg | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00062346 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086328 | ||||||||
| 00086329 | |||||||||
| 00086330 | |||||||||
| 00117697 | |||||||||
| 00117698 | |||||||||
| 00117699 | |||||||||
| Ortholog (37) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19C4.8 | |||||||
| Corresponding_transcript | T19C4.8.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053513 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1018307 | ||||||||
| Expr1157087 | |||||||||
| Expr2016332 | |||||||||
| Expr2034559 | |||||||||
| Drives_construct | WBCnstr00035132 | ||||||||
| Construct_product | WBCnstr00035132 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster | WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq | ||||||||
| WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00050488:adult_vs_dauer_regulated_N2_20C | |||||||||
| WBPaper00055482:pmt-2(RNAi)_downregulated | |||||||||
| WBPaper00056161:male_enriched_siRNA | |||||||||
| WBPaper00060661:sensory-neuron_enriched | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| cgc4489_group_9 | |||||||||
| [cgc6390]:intrinsic | |||||||||
| Map_info | Map | V | Position | 2.96224 | Error | 0.000962 | |||
| Positive | Positive_clone | T19C4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
