WormBase Tree Display for Gene: WBGene00005001
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WBGene00005001 | Evidence | Author_evidence | Patthy L | ||||||
---|---|---|---|---|---|---|---|---|---|
Hodgkin JA | |||||||||
SMap | S_parent | Sequence | F32D8 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | spp-16 | |||||||
Sequence_name | F32D8.9 | ||||||||
Molecular_name | F32D8.9 | ||||||||
F32D8.9.1 | |||||||||
CE05788 | |||||||||
Other_name | CELE_F32D8.9 | Accession_evidence | NDB | BX284605 | |||||
Public_name | spp-16 | ||||||||
DB_info | Database | AceView | gene | 5L378 | |||||
WormQTL | gene | WBGene00005001 | |||||||
WormFlux | gene | WBGene00005001 | |||||||
NDB | locus_tag | CELE_F32D8.9 | |||||||
NCBI | gene | 185207 | |||||||
RefSeq | protein | NM_073379.8 | |||||||
TrEMBL | UniProtAcc | Q19968 | |||||||
UniProt_GCRP | UniProtAcc | Q19968 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | spp | ||||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Structured_description | Automated_description | Enriched in ALA; germ line; head mesodermal cell; intestine; and pm8 based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; cyd-1; and ztf-11 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including methylmercuric chloride; rotenone; and mianserin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Saposin-like and Saposin B type domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F32D8.9 | |||||||
Corresponding_transcript | F32D8.9.1 | ||||||||
Other_sequence | CRC00535_1 | ||||||||
FD516852.1 | |||||||||
CSC01514_1 | |||||||||
CR11401 | |||||||||
Associated_feature | WBsf234463 | ||||||||
WBsf234464 | |||||||||
Experimental_info | RNAi_result (4) | ||||||||
Expr_pattern | Expr1029135 | ||||||||
Expr1032488 | |||||||||
Expr1150029 | |||||||||
Expr2016071 | |||||||||
Expr2034307 | |||||||||
Drives_construct | WBCnstr00035277 | ||||||||
Construct_product | WBCnstr00035277 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (145) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | V | Position | 2.82959 | Error | 0.000825 | |||
Positive | Positive_clone | F32D8 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024209 | ||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |