WormBase Tree Display for Gene: WBGene00004487

WBGene00004487 SMap: S_parent: Sequence: Y57G11C
  Identity: Version: 2
    Name: CGC_name: rps-18
      Sequence_name: Y57G11C.16
      Molecular_name: Y57G11C.16
        Y57G11C.16.1
        CE14956
      Other_name: uS13 Person_evidence: WBPerson555
        CELE_Y57G11C.16 Accession_evidence: NDB BX284604
      Public_name: rps-18
    DB_info: Database: AceView gene 4P591
        WormQTL gene WBGene00004487
        WormFlux gene WBGene00004487
        NDB locus_tag CELE_Y57G11C.16
        Panther gene CAEEL|WormBase=WBGene00004487|UniProtKB=O18240
          family PTHR10871
        NCBI gene 178408
        RefSeq protein NM_070393.5
        TREEFAM TREEFAM_ID TF317649
        TrEMBL UniProtAcc O18240
        UniProt_GCRP UniProtAcc O18240
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 17 May 2024 14:24:05 WBPerson51134 Name_change: Other_name: uS13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rps
    Allele (21)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rps18 using blastP
    Strain: WBStrain00037467
      WBStrain00005438
      WBStrain00005439
      WBStrain00005440
      WBStrain00005442
      WBStrain00005444
      WBStrain00005446
      WBStrain00050656
      WBStrain00050659
    RNASeq_FPKM (74)
    GO_annotation: 00033177
      00033178
      00033179
      00033180
      00117032
      00117033
      00117034
      00117035
      00117036
    Ortholog (46)
    Structured_description: Concise_description: rps-18 encodes a small ribosomal subunit S18 protein. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosol. Predicted to be part of small ribosomal subunit. Is an ortholog of human RPS18 (ribosomal protein S18). Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: Y57G11C.16
    Corresponding_transcript: Y57G11C.16.1
    Other_sequence (404)
    Associated_feature: WBsf655064
      WBsf660942
      WBsf660943
      WBsf998644
      WBsf998645
      WBsf229536
      WBsf229537
      WBsf229538
  Experimental_info: RNAi_result: WBRNAi00057688 Inferred_automatically: RNAi_primary
      WBRNAi00093750 Inferred_automatically: RNAi_primary
      WBRNAi00095083 Inferred_automatically: RNAi_primary
      WBRNAi00064944 Inferred_automatically: RNAi_primary
      WBRNAi00009400 Inferred_automatically: RNAi_primary
      WBRNAi00079221 Inferred_automatically: RNAi_primary
      WBRNAi00026877 Inferred_automatically: RNAi_primary
      WBRNAi00079180 Inferred_automatically: RNAi_primary
      WBRNAi00071495 Inferred_automatically: RNAi_primary
      WBRNAi00085465 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15107
      Expr1018529
      Expr1032290
      Expr1161100
      Expr2015512
      Expr2033747
    Drives_construct: WBCnstr00035446
      WBCnstr00039103
      WBCnstr00039778
    Construct_product: WBCnstr00035446
      WBCnstr00039103
      WBCnstr00039778
    Microarray_results (21)
    Expression_cluster (173)
    Interaction (283)
  Map_info: Map: IV Position: 12.5309 Error: 0.001533
    Positive: Positive_clone: Y57G11C Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005356
    WBPaper00035215
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    Approved Human ortholog symbol: RPS18 Person_evidence: WBPerson555
    New system for naming ribosomal proteins name: uS13 Paper_evidence: WBPaper00066708
    Standard Protein name: RPS-18 Person_evidence: WBPerson555
  Method: Gene