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WormBase Tree Display for Gene: WBGene00004422

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Name Class

WBGene00004422SMapS_parentSequenceT22F3
IdentityVersion3
NameCGC_namerpl-11.1
Sequence_nameT22F3.4
Molecular_nameT22F3.4a
T22F3.4a.1
CE13968
Other_namenog-1Person_evidenceWBPerson275
uL5APerson_evidenceWBPerson555
CELE_T22F3.4Accession_evidenceNDBBX284605
Public_namerpl-11.1
DB_infoDatabaseAceViewgene5E64
WormQTLgeneWBGene00004422
WormFluxgeneWBGene00004422
NDBlocus_tagCELE_T22F3.4
PanthergeneCAEEL|WormBase=WBGene00004422|UniProtKB=Q94300
familyPTHR11994
NCBIgene178778
RefSeqproteinNM_071607.7
SwissProtUniProtAccQ94300
UniProt_GCRPUniProtAccQ94300
OMIMgene604175
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
209 Sep 2005 11:15:49WBPerson2970EventAcquires_mergeWBGene00003781
Name_changeOther_namenog-1
317 May 2024 14:24:05WBPerson51134Name_changeOther_nameuL5A
Acquires_mergeWBGene00003781
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
Allele (26)
Legacy_informationOrthologous to yeast (S.cerevisiae) ribosomal protein rpl11 using blastP
StrainWBStrain00007706
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (41)
ParalogWBGene00004423Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionrpl-11.1 encodes a large ribosomal subunit L11 protein.Paper_evidenceWBPaper00004424
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytoplasm; nucleus; and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Expressed in germ line. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 7 and T-cell acute lymphoblastic leukemia. Is an ortholog of human RPL11 (ribosomal protein L11).Paper_evidenceWBPaper00065943
WBPaper00067038
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS296 version of WormBase
Date_last_updated20 Mar 2025 00:00:00
Disease_infoPotential_modelDOID:0111878Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10301)
DOID:5603Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10301)
Molecular_infoCorresponding_CDST22F3.4a
Corresponding_CDS_historyT22F3.4b:wp292
Corresponding_transcriptT22F3.4a.1
Other_sequence (140)
Associated_featureWBsf652538
WBsf668834
WBsf999642
WBsf1019387
WBsf233503
Experimental_infoRNAi_result (17)
Expr_patternExpr10952
Expr1020990
Expr1032226
Expr1157396
Expr2015438
Expr2033673
Drives_constructWBCnstr00005927
WBCnstr00035499
Construct_productWBCnstr00035499
Microarray_results (21)
Expression_cluster (207)
Interaction (259)
Map_infoMapVPosition-8.60276Error0.01313
PositivePositive_cloneT22F3Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5444
4277
5327
Pos_neg_data10780
10781
10782
Pseudo_map_position
Reference (11)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
Approved Human ortholog symbol: RPL11Person_evidenceWBPerson555
New system for naming ribosomal proteins name: uL5APaper_evidenceWBPaper00066708
Standard Protein name: RPL-11.1Person_evidenceWBPerson555
MethodGene