WormBase Tree Display for Gene: WBGene00004332
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WBGene00004332 | SMap | S_parent | Sequence | Y18H1A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | rec-1 | Person_evidence | WBPerson533 | |||||
WBPerson1795 | |||||||||
Sequence_name | Y18H1A.7 | ||||||||
Molecular_name | Y18H1A.7a | ||||||||
Y18H1A.7a.1 | |||||||||
CE33587 | |||||||||
Y18H1A.7b | |||||||||
CE49243 | |||||||||
Y18H1A.7b.1 | |||||||||
Other_name | CELE_Y18H1A.7 | Accession_evidence | NDB | BX284601 | |||||
Public_name | rec-1 | ||||||||
DB_info | Database | NDB | locus_tag | CELE_Y18H1A.7 | |||||
NCBI | gene | 171664 | |||||||
RefSeq | protein | NM_058372.8 | |||||||
NM_001306247.3 | |||||||||
TrEMBL | UniProtAcc | V6CLD8 | |||||||
Q9BL91 | |||||||||
UniProt_GCRP | UniProtAcc | Q9BL91 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 13 Oct 2015 08:38:50 | WBPerson2970 | Event | Acquires_merge | WBGene00021211 | ||||
Name_change | Sequence_name | Y18H1A.7 | |||||||
Acquires_merge | WBGene00021211 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rec | ||||||||
Reference_allele | WBVar00241753 | ||||||||
Allele (41) | |||||||||
Legacy_information | s180 : general enhancer of meiotic recombination. ES1. | ||||||||
Increase recomb. | |||||||||
See also s180 | |||||||||
[Rose AM ] increases meiotic recombination in gene clusters, reduces recombination on chromosome arms, distribution of crossovers in Rec-1 approximates physical map. ES1 ME3 NA1. | |||||||||
[C.elegansII] s180 : increases meiotic recombination in gene clusters, reduces recombination on chromosome arms; distribution of crossovers in Rec-1 approximates physical map. ES1, ME3. NA1. [Rose and Baillie 1979; Zetka and Rose 1995; KR] | |||||||||
Strain (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00087373 | ||||||||
00087374 | |||||||||
00087375 | |||||||||
Ortholog | chrI_pilon.g113 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Concise_description | rec-1 affects the recombination frequency in the central gene cluster region of autosomes and has been shown to alter the distribution of genes on the genetic map of the X chromosome, also affects X-chromosome nondisjunction; does not appear to act pre-meiotically. | Paper_evidence (3) | ||||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 29 Sep 2015 00:00:00 | ||||||||
Automated_description | Involved in meiotic DNA double-strand break formation involved in reciprocal meiotic recombination. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y18H1A.7a | |||||||
Y18H1A.7b | |||||||||
Corresponding_CDS_history | Y18H1A.7:wp96 | ||||||||
Corresponding_transcript | Y18H1A.7a.1 | ||||||||
Y18H1A.7b.1 | |||||||||
Associated_feature | WBsf648913 | ||||||||
WBsf982561 | |||||||||
WBsf1009119 | |||||||||
WBsf218932 | |||||||||
Experimental_info | RNAi_result | WBRNAi00055631 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00084348 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00103863 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028467 | ||||||||
Expr1039252 | |||||||||
Expr1159145 | |||||||||
Expr2015290 | |||||||||
Expr2033524 | |||||||||
Drives_construct | WBCnstr00020890 | ||||||||
WBCnstr00020891 | |||||||||
WBCnstr00020892 | |||||||||
Construct_product | WBCnstr00020890 | ||||||||
WBCnstr00020892 | |||||||||
Microarray_results (14) | |||||||||
Expression_cluster (94) | |||||||||
WBProcess | WBbiopr:00000109 | ||||||||
Map_info | Map | I | Position | -18.5556 | |||||
Well_ordered | |||||||||
Positive | Inside_rearr | eDf24 | |||||||
Positive_clone | Y18H1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Pos_neg_data | 8939 | |||||||
8940 | |||||||||
8941 | |||||||||
8942 | |||||||||
8943 | |||||||||
Reference (28) | |||||||||
Method | Gene |