WormBase Tree Display for Gene: WBGene00004163
expand all nodes | collapse all nodes | view schema
| WBGene00004163 | SMap | S_parent | Sequence | Y39A3CR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-82 | Person_evidence | WBPerson625 | |||||
| Sequence_name | Y39A3CR.7 | ||||||||
| Molecular_name | Y39A3CR.7 | ||||||||
| Y39A3CR.7.1 | |||||||||
| CE29106 | |||||||||
| Other_name | CELE_Y39A3CR.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pqn-82 | ||||||||
| DB_info | Database | AceView | gene | 3C941 | |||||
| WormQTL | gene | WBGene00004163 | |||||||
| WormFlux | gene | WBGene00004163 | |||||||
| NDB | locus_tag | CELE_Y39A3CR.7 | |||||||
| NCBI | gene | 175330 | |||||||
| RefSeq | protein | NM_065063.7 | |||||||
| TrEMBL | UniProtAcc | Q9N411 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N411 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (71) | |||||||||
| Strain | WBStrain00003664 | ||||||||
| WBStrain00037814 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3068 | ||||||||
| Ortholog | WBGene00149616 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| WBGene00157366 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00164208 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00087500 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39A3CR.7 | |||||||
| Corresponding_transcript | Y39A3CR.7.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf644964 | ||||||||
| WBsf991401 | |||||||||
| WBsf991402 | |||||||||
| WBsf991403 | |||||||||
| WBsf991404 | |||||||||
| WBsf1014313 | |||||||||
| WBsf1014314 | |||||||||
| WBsf224471 | |||||||||
| WBsf224472 | |||||||||
| WBsf224473 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056157 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr6946 | ||||||||
| Expr1018616 | |||||||||
| Expr1032029 | |||||||||
| Expr1159666 | |||||||||
| Expr2015074 | |||||||||
| Expr2033310 | |||||||||
| Drives_construct | WBCnstr00004101 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000582316 | ||||||||
| Map_info | Map | III | Position | -15.9569 | Error | 0.020193 | |||
| Positive | Positive_clone | Y39A3CR | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00052392 | ||||||||
| WBPaper00053902 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
