WormBase Tree Display for Gene: WBGene00004131
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WBGene00004131 | SMap | S_parent | Sequence | F55A12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tent-5 | Person_evidence | WBPerson46847 | |||||
Sequence_name | F55A12.9 | ||||||||
Molecular_name (15) | |||||||||
Other_name | pqn-44 | Person_evidence | WBPerson625 | ||||||
CELE_F55A12.9 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | tent-5 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 04 Jan 2021 18:23:07 | WBPerson1983 | Name_change | CGC_name | tent-5 | ||||
Other_name | pqn-44 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tent | ||||||||
Allele (141) | |||||||||
Strain | WBStrain00003035 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00020889 | ||||||||
00020890 | |||||||||
00020891 | |||||||||
00020892 | |||||||||
00107169 | |||||||||
Ortholog (47) | |||||||||
Paralog (18) | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable poly(A) RNA polymerase activity. Predicted to be involved in mRNA stabilization. Human ortholog(s) of this gene implicated in lung non-small cell carcinoma; osteoarthritis; and osteogenesis imperfecta type 18. Is an ortholog of human TENT5A (terminal nucleotidyltransferase 5A); TENT5B (terminal nucleotidyltransferase 5B); and TENT5D (terminal nucleotidyltransferase 5D). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0111848 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18345) | ||||
DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18345) | ||||||
DOID:8398 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18345) | ||||||
Molecular_info | Corresponding_CDS | F55A12.9a | |||||||
F55A12.9b | |||||||||
F55A12.9c | |||||||||
F55A12.9d | |||||||||
F55A12.9e | |||||||||
Corresponding_transcript | F55A12.9a.1 | ||||||||
F55A12.9b.1 | |||||||||
F55A12.9c.1 | |||||||||
F55A12.9d.1 | |||||||||
F55A12.9e.1 | |||||||||
Other_sequence (32) | |||||||||
Associated_feature (15) | |||||||||
Experimental_info | RNAi_result | WBRNAi00041046 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003779 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048424 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00116611 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048425 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1248 | ||||||||
Expr6193 | |||||||||
Expr1011852 | |||||||||
Expr1032006 | |||||||||
Expr1152213 | |||||||||
Expr2015054 | |||||||||
Expr2033289 | |||||||||
Drives_construct | WBCnstr00003535 | ||||||||
WBCnstr00035677 | |||||||||
Construct_product | WBCnstr00035677 | ||||||||
Regulate_expr_cluster | WBPaper00064841:tent-5(tm3504)_downregulated_protein | ||||||||
WBPaper00064841:tent-5(tm3504)_downregulated_transcript | |||||||||
WBPaper00064841:tent-5(tm3504)_upregulated_protein | |||||||||
WBPaper00064841:tent-5(tm3504)_upregulated_transcript | |||||||||
Microarray_results (40) | |||||||||
Expression_cluster (291) | |||||||||
Interaction (26) | |||||||||
Map_info | Map | I | Position | -0.030175 | Error | 0.001794 | |||
Positive | Positive_clone | F55A12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00061869 | |||||||||
WBPaper00063356 | |||||||||
WBPaper00064339 | |||||||||
WBPaper00064841 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |