WormBase Tree Display for Gene: WBGene00004029
expand all nodes | collapse all nodes | view schema
WBGene00004029 | SMap | S_parent | Sequence | K09B11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pik-1 | Person_evidence | WBPerson1122 | |||||
Sequence_name | K09B11.1 | ||||||||
Molecular_name | K09B11.1a | ||||||||
K09B11.1a.1 | |||||||||
CE31033 | |||||||||
K09B11.1b | |||||||||
CE45959 | |||||||||
K09B11.1a.2 | |||||||||
K09B11.1b.1 | |||||||||
K09B11.1c | |||||||||
Other_name | CELE_K09B11.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | pik-1 | ||||||||
DB_info | Database (15) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 15 Aug 2011 12:02:42 | WBPerson4025 | Event | Acquires_merge | WBGene00206467 | ||||
Acquires_merge | WBGene00206467 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pik | ||||||||
Allele (149) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Contained_in_operon | CEOP4552 | ||||||||
Ortholog (42) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | The pik-1 gene encodes a pelle/IRAK kinase homolog that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable ATP binding activity; protein serine kinase activity; and protein serine/threonine kinase activity. Predicted to be involved in cellular response to lipopolysaccharide and signal transduction. Predicted to be located in cytoplasm; nucleus; and plasma membrane. Expressed in RMGL; RMGR; and nervous system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease of musculoskeletal system (multiple); diffuse scleroderma; and melioidosis. Is an ortholog of human IRAK1 (interleukin 1 receptor associated kinase 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17967) | ||||
DOID:9008 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
DOID:7147 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
DOID:8893 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
DOID:399 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
DOID:1580 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
DOID:1749 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
DOID:5052 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
Molecular_info | Corresponding_CDS | K09B11.1a | |||||||
K09B11.1b | |||||||||
Corresponding_CDS_history | K09B11.1:wp80 | ||||||||
Corresponding_transcript | K09B11.1c | ||||||||
K09B11.1a.1 | |||||||||
K09B11.1a.2 | |||||||||
K09B11.1b.1 | |||||||||
Other_sequence (35) | |||||||||
Associated_feature | WBsf998403 | ||||||||
WBsf998404 | |||||||||
Experimental_info | RNAi_result | WBRNAi00112978 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016868 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113208 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034179 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00075962 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050370 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13217 | ||||||||
Expr1010645 | |||||||||
Expr1031931 | |||||||||
Expr1154076 | |||||||||
Expr2014927 | |||||||||
Expr2033162 | |||||||||
Drives_construct | WBCnstr00038894 | ||||||||
Construct_product | WBCnstr00038894 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (63) | |||||||||
Interaction (320) | |||||||||
WBProcess | WBbiopr:00000039 | ||||||||
Map_info | Map | IV | Position | 9.21545 | Error | 0.07179 | |||
Positive | Positive_clone | K09B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4585 | |||||||
4914 | |||||||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark | Sequence given as K09B11 BUT subsequence not given [sdm] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |