WormBase Tree Display for Gene: WBGene00003933
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WBGene00003933 | SMap | S_parent | Sequence | T27B1 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pat | |||||
Allele (51) | ||||||
Legacy_information | [Williams BD] Severe Pat phenotype; some pharyngeal pumping. | |||||
[C.elegansII] st558 : severe Pat phenotype; some pharyngeal pumping. [Williams and Waterston 1994; RW] | ||||||
Strain | WBStrain00033501 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00072740 | |||||
00072741 | ||||||
00072742 | ||||||
00072743 | ||||||
00072744 | ||||||
00072745 | ||||||
00072746 | ||||||
00072747 | ||||||
00072748 | ||||||
00072749 | ||||||
Ortholog (26) | ||||||
Structured_description | Automated_description | Predicted to enable chromatin insulator sequence binding activity. Involved in regulation of striated muscle cell differentiation. Located in nucleus. Expressed in body wall musculature and gonad. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | |||||
Date_last_updated | 24 Apr 2024 00:00:00 | |||||
Molecular_info | Corresponding_CDS | T27B1.2a | ||||
T27B1.2b | ||||||
T27B1.2c | ||||||
T27B1.2d | ||||||
Corresponding_transcript | T27B1.2a.1 | |||||
T27B1.2b.1 | ||||||
T27B1.2c.1 | ||||||
T27B1.2d.1 | ||||||
Other_sequence | JI461044.1 | |||||
JI170232.1 | ||||||
BUC01144_1 | ||||||
JI478385.1 | ||||||
XI04992 | ||||||
JI482849.1 | ||||||
PPC02773_1 | ||||||
Associated_feature (26) | ||||||
Transcription_factor | WBTranscriptionFactor001153 | |||||
Experimental_info | RNAi_result | WBRNAi00107525 | Inferred_automatically | RNAi_primary | ||
WBRNAi00026413 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00081188 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00081192 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00054272 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00111581 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00107234 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00009226 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00111582 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00107150 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr10031 | |||||
Expr1031866 | ||||||
Expr1157821 | ||||||
Expr2014754 | ||||||
Expr2032988 | ||||||
Drives_construct | WBCnstr00015012 | |||||
WBCnstr00035787 | ||||||
Construct_product | WBCnstr00015012 | |||||
WBCnstr00035787 | ||||||
Antibody | WBAntibody00002324 | |||||
Microarray_results (20) | ||||||
Expression_cluster (205) | ||||||
Interaction (42) | ||||||
WBProcess | WBbiopr:00000006 | |||||
Map_info | Map | X | Position | 24.0236 | ||
Positive | Positive_clone | T27B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Mapping_data | Pos_neg_data | 8155 | ||||
8156 | ||||||
Reference | WBPaper00001894 | |||||
WBPaper00012327 | ||||||
WBPaper00026533 | ||||||
WBPaper00027228 | ||||||
WBPaper00034662 | ||||||
WBPaper00036199 | ||||||
WBPaper00041122 | ||||||
WBPaper00055090 | ||||||
Remark | Data extracted from Williams & Waterston 1994 | |||||
Method | Gene |