WormBase Tree Display for Gene: WBGene00003801
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| WBGene00003801 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C29E4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | npp-15 | Person_evidence | WBPerson1780 | |||||
| Sequence_name | C29E4.4 | ||||||||
| Molecular_name | C29E4.4 | ||||||||
| C29E4.4.1 | |||||||||
| CE46384 | |||||||||
| Other_name | CeNup133 | Person_evidence | WBPerson1780 | ||||||
| CELE_C29E4.4 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | npp-15 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (50) | |||||||||
| Strain | WBStrain00002231 | ||||||||
| WBStrain00002294 | |||||||||
| WBStrain00036614 | |||||||||
| WBStrain00003836 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP3465 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of nuclear pore. Predicted to be involved in poly(A)+ mRNA export from nucleus; protein import into nucleus; and transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery. Located in kinetochore and nuclear membrane. Part of nuclear pore. Human ortholog(s) of this gene implicated in Galloway-Mowat syndrome and nephrotic syndrome type 18. Is an ortholog of human NUP133 (nucleoporin 133). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080694 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18016) | ||||
| DOID:0080393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18016) | ||||||
| Molecular_info | Corresponding_CDS | C29E4.4 | |||||||
| Corresponding_CDS_history | C29E4.4:wp130 | ||||||||
| C29E4.4:wp227 | |||||||||
| Corresponding_transcript | C29E4.4.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf645369 | ||||||||
| WBsf654977 | |||||||||
| WBsf659206 | |||||||||
| WBsf659207 | |||||||||
| WBsf659208 | |||||||||
| WBsf225301 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002962 | ||||||||
| WBCnstr00004472 | |||||||||
| WBCnstr00035859 | |||||||||
| Construct_product | WBCnstr00009671 | ||||||||
| WBCnstr00035859 | |||||||||
| WBCnstr00038984 | |||||||||
| Antibody | WBAntibody00002305 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (109) | |||||||||
| Map_info | Map | III | Position | -0.488878 | Error | 0.002195 | |||
| Positive | Positive_clone | C29E4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006202 | ||||||||
| WBPaper00027740 | |||||||||
| WBPaper00029257 | |||||||||
| WBPaper00036964 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038931 | |||||||||
| WBPaper00040620 | |||||||||
| WBPaper00066200 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
