WormBase Tree Display for Gene: WBGene00003098
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WBGene00003098 | SMap | S_parent | Sequence | C54C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lys-9 | Person_evidence | WBPerson168 | |||||
Sequence_name | C54C8.6 | ||||||||
Molecular_name | C54C8.6 | ||||||||
C54C8.6.1 | |||||||||
CE46030 | |||||||||
Other_name | CELE_C54C8.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | lys-9 | ||||||||
DB_info | Database | AceView | gene | 1N46 | |||||
WormQTL | gene | WBGene00003098 | |||||||
WormFlux | gene | WBGene00003098 | |||||||
NDB | locus_tag | CELE_C54C8.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003098|UniProtKB=O02233 | |||||||
family | PTHR23208 | ||||||||
NCBI | gene | 183772 | |||||||
RefSeq | protein | NM_060760.2 | |||||||
TREEFAM | TREEFAM_ID | TF316378 | |||||||
TrEMBL | UniProtAcc | O02233 | |||||||
UniProt_GCRP | UniProtAcc | O02233 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lys | ||||||||
Allele (28) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00025432 | ||||||||
00025433 | |||||||||
00025434 | |||||||||
00025435 | |||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00003090 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003091 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003092 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003093 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003094 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003095 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00003096 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003097 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003099 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable hydrolase activity. Predicted to be involved in innate immune response and signal transduction. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C54C8.6 | |||||||
Corresponding_CDS_history | C54C8.6:wp225 | ||||||||
Corresponding_transcript | C54C8.6.1 | ||||||||
Experimental_info (5) | |||||||||
Map_info | Map | I | Position | 13.2237 | Error | 0.000543 | |||
Positive | Positive_clone | C54C8 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005382 | ||||||||
WBPaper00006437 | |||||||||
WBPaper00024209 | |||||||||
WBPaper00031802 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |