WormBase Tree Display for Gene: WBGene00002274

WBGene00002274 Evidence: Accession_evidence: EMBL AB038502
  SMap: S_parent: Sequence: F38A5
  Identity: Version: 1
    Name: CGC_name: lec-11
      Sequence_name: F38A5.3
      Molecular_name: F38A5.3a
        F38A5.3a.1
        CE28303
        F38A5.3b
      Other_name: CELE_F38A5.3 Accession_evidence: NDB BX284604
      Public_name: lec-11
    DB_info: Database: AceView gene 4H354
        WormQTL gene WBGene00002274
        WormFlux gene WBGene00002274
        NDB locus_tag CELE_F38A5.3
        Panther gene CAEEL|WormBase=WBGene00002274|UniProtKB=Q94215
          family PTHR11346
        NCBI gene 177420
        RefSeq protein NR_131549.1
            NM_001028020.6
        TrEMBL UniProtAcc Q94215
        UniProt_GCRP UniProtAcc Q94215
        RNAcentral URSid URS0000438852
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:27 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lec
    Allele (26)
    RNASeq_FPKM (74)
    GO_annotation: 00090503
      00090504
      00090505
      00090506
      00090507
      00090508
      00090509
      00114412
    Ortholog (32)
    Paralog (26)
    Structured_description: Concise_description: lec-11 encodes a predicted member of the galectin family that shares highest similarity with lec-7 through lec-10 within the C-terminal tail and also shares a higher relative histidine content in common with lec-7 through lec-10; can bind sugar in vitro. Paper_evidence: WBPaper00011877
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable carbohydrate binding activity and galactoside binding activity. Involved in innate immune response. Located in cytoplasm. Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: F38A5.3a
    Corresponding_CDS_history: F38A5.3b:wp240
    Corresponding_transcript: F38A5.3b
      F38A5.3a.1
    Other_sequence (11)
    Associated_feature: WBsf651854
      WBsf230176
  Experimental_info: RNAi_result: WBRNAi00095431 Inferred_automatically: RNAi_primary
      WBRNAi00014529 Inferred_automatically: RNAi_primary
      WBRNAi00046673 Inferred_automatically: RNAi_primary
      WBRNAi00095428 Inferred_automatically: RNAi_primary
      WBRNAi00095415 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5991
      Expr1021522
      Expr1150548
      Expr2013032
      Expr2031264
    Drives_construct: WBCnstr00003453
      WBCnstr00036339
    Construct_product: WBCnstr00036339
    Microarray_results (25)
    Expression_cluster (313)
    Interaction: WBInteraction000348806
      WBInteraction000350495
      WBInteraction000405645
      WBInteraction000432845
      WBInteraction000542656
  Map_info: Map: IV Position: 3.21089 Error: 0.000399
    Positive: Positive_clone: F38A5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5293
        4804
        4840
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene