WormBase Tree Display for Gene: WBGene00002176
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WBGene00002176 | Evidence | Person_evidence | WBPerson1068 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F56D12 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | jip-1 | Person_evidence | WBPerson1315 | |||||
Sequence_name | F56D12.4 | ||||||||
Molecular_name (18) | |||||||||
Other_name | CELE_F56D12.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | jip-1 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00002176 | |||||
WormFlux | gene | WBGene00002176 | |||||||
NDB | locus_tag | CELE_F56D12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002176|UniProtKB=G4RZC8 | |||||||
family | PTHR11232 | ||||||||
NCBI | gene | 173513 | |||||||
RefSeq | protein | NM_001420586.1 | |||||||
NM_001038242.6 | |||||||||
NM_001038243.6 | |||||||||
NM_001377692.2 | |||||||||
NM_001420585.1 | |||||||||
NM_001377691.2 | |||||||||
TREEFAM | TREEFAM_ID | TF325073 | |||||||
TrEMBL | UniProtAcc | A0A5S9MNX6 | |||||||
A0A5S9MN04 | |||||||||
G4RZC8 | |||||||||
A0A5S9MQ27 | |||||||||
G4RZC9 | |||||||||
O16643 | |||||||||
UniProt_GCRP | UniProtAcc | G4RZC8 | |||||||
OMIM | gene | 604641 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | jip | ||||||||
Allele (478) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000420 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00000894 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001116 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00009930 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00003830 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | JIP-1 is partly similar to the human gene ISLET-BRAIN 1 (MAPK8IP1; OMIM:604641), which when mutated leads to type II diabetes. | Curator_confirmed | WBPerson1823 | |||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Is an ortholog of human MAPK8IP1 (mitogen-activated protein kinase 8 interacting protein 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6882) | ||||
Molecular_info | Corresponding_CDS | F56D12.4a | |||||||
F56D12.4b | |||||||||
F56D12.4c | |||||||||
F56D12.4d | |||||||||
F56D12.4e | |||||||||
F56D12.4f | |||||||||
Corresponding_CDS_history | F56D12.4:wp97 | ||||||||
F56D12.4:wp112 | |||||||||
F56D12.4:wp127 | |||||||||
F56D12.4:wp149 | |||||||||
F56D12.4a:wp274 | |||||||||
Corresponding_transcript | F56D12.4a.1 | ||||||||
F56D12.4b.1 | |||||||||
F56D12.4c.1 | |||||||||
F56D12.4d.1 | |||||||||
F56D12.4e.1 | |||||||||
F56D12.4f.1 | |||||||||
Other_sequence (50) | |||||||||
Associated_feature (20) | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr1027659 | ||||||||
Expr1031271 | |||||||||
Expr1152447 | |||||||||
Expr2012883 | |||||||||
Expr2031117 | |||||||||
Microarray_results (41) | |||||||||
Expression_cluster (175) | |||||||||
Interaction (19) | |||||||||
Map_info | Map | II | Position | -15.4846 | Error | 0.004771 | |||
Positive | Positive_clone | F56D12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00018823 | ||||||||
WBPaper00024295 | |||||||||
WBPaper00025342 | |||||||||
WBPaper00028624 | |||||||||
WBPaper00030247 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00042589 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |