WormBase Tree Display for Gene: WBGene00002077
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| WBGene00002077 | SMap | S_parent | Sequence | C53D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | imb-3 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | C53D5.6 | ||||||||
| Molecular_name | C53D5.6 | ||||||||
| C53D5.6.1 | |||||||||
| CE26971 | |||||||||
| Other_name | CELE_C53D5.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | imb-3 | ||||||||
| DB_info | Database | AceView | gene | 1A780 | |||||
| WormQTL | gene | WBGene00002077 | |||||||
| WormFlux | gene | WBGene00002077 | |||||||
| NDB | locus_tag | CELE_C53D5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002077|UniProtKB=Q9N5V3 | |||||||
| family | PTHR10527 | ||||||||
| NCBI | gene | 3565440 | |||||||
| RefSeq | protein | NM_058314.7 | |||||||
| TREEFAM | TREEFAM_ID | TF300344 | |||||||
| TrEMBL | UniProtAcc | Q9N5V3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5V3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | imb | ||||||||
| Allele (50) | |||||||||
| Strain | WBStrain00036536 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00002075 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00002076 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | imb-3 encodes an importin-beta-like protein orthologous to Drosophila, vertebrate, and yeast importin/karyopherin-beta3; IMB-3 is predicted to function as a nuclear transport factor that, with the RAN-1 GTPase, regulates nuclear import of ribosomal proteins; in C. elegans, IMB-3 is essential for embryogenesis and germline development, and may also be required for normal postembryonic growth rates. | Paper_evidence | WBPaper00004402 | |||||
| WBPaper00004651 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable nuclear import signal receptor activity and nuclear localization sequence binding activity. Predicted to be involved in protein import into nucleus. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human IPO5 (importin 5) and RANBP6 (RAN binding protein 6). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53D5.6 | |||||||
| Corresponding_transcript | C53D5.6.1 | ||||||||
| Other_sequence (48) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr1027150 | ||||||||
| Expr1031230 | |||||||||
| Expr1147061 | |||||||||
| Expr2012730 | |||||||||
| Expr2030967 | |||||||||
| Drives_construct | WBCnstr00036470 | ||||||||
| Construct_product | WBCnstr00036470 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (178) | |||||||||
| Interaction (213) | |||||||||
| Map_info | Map | I | Position | -19.0945 | Error | 0.006374 | |||
| Positive | Positive_clone | C53D5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006510 | ||||||||
| WBPaper00031613 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00052113 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056909 | |||||||||
| WBPaper00066060 | |||||||||
| WBPaper00066405 | |||||||||
| Remark | Sequence connection from [Mach KE] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
