WormBase Tree Display for Gene: WBGene00001997

WBGene00001997 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y39A1A
  Identity: Version: 1
    Name: CGC_name: hpr-9
      Sequence_name: Y39A1A.23
      Molecular_name: Y39A1A.23a
        Y39A1A.23a.1
        CE51732
        Y39A1A.23b
        CE33217
        Y39A1A.23b.1
      Other_name: Y39A1A Paper_evidence: WBPaper00004757
        CELE_Y39A1A.23 Accession_evidence: NDB BX284603
      Public_name: hpr-9
    DB_info: Database: AceView gene 3L715
        WormQTL gene WBGene00001997
        WormFlux gene WBGene00001997
        NDB locus_tag CELE_Y39A1A.23
        Panther gene CAEEL|WormBase=WBGene00001997|UniProtKB=Q95Q27
          family PTHR15237
        NCBI gene 176483
        RefSeq protein NM_066941.7
            NM_001379907.1
        SwissProt UniProtAcc Q95Q27
        TrEMBL UniProtAcc A0A1W7LFZ8
        UniProt_GCRP UniProtAcc Q95Q27
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpr
    Allele (132)
    Strain: WBStrain00032541
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (32)
    Structured_description: Automated_description: Predicted to be involved in DNA integrity checkpoint signaling; DNA repair; and cellular response to ionizing radiation. Predicted to be located in nucleus. Predicted to be part of checkpoint clamp complex. Is an ortholog of human RAD9B (RAD9 checkpoint clamp component B). Paper_evidence: WBPaper00065943
            WBPaper00067038
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS296 version of WormBase
          Date_last_updated: 20 Mar 2025 00:00:00
  Molecular_info: Corresponding_CDS: Y39A1A.23a
      Y39A1A.23b
    Corresponding_CDS_history: Y39A1A.23:wp93
      Y39A1A.23:wp254
    Corresponding_transcript: Y39A1A.23a.1
      Y39A1A.23b.1
    Other_sequence: JI474359.1
      CR04867
      CRC10080_1
      Dviv_isotig25853
    Associated_feature: WBsf994089
      WBsf225741
  Experimental_info: RNAi_result: WBRNAi00006327 Inferred_automatically: RNAi_primary
      WBRNAi00077188 Inferred_automatically: RNAi_primary
      WBRNAi00056113 Inferred_automatically: RNAi_primary
      WBRNAi00036889 Inferred_automatically: RNAi_primary
      WBRNAi00056112 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013318
      Expr1031162
      Expr1159628
      Expr2012588
      Expr2030824
    Microarray_results (14)
    Expression_cluster (81)
    Interaction (28)
    WBProcess: WBbiopr:00000014
      WBbiopr:00000091
  Map_info: Map: III Position: 4.04027 Error: 0.026206
    Positive: Positive_clone: Y39A1A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004757
    WBPaper00005597
    WBPaper00011396
    WBPaper00027223
    WBPaper00038491
    WBPaper00055090
    WBPaper00061557
  Remark: Sequence connection from [Boulton S, Vidal M]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene