WormBase Tree Display for Gene: WBGene00001878
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| WBGene00001878 | SMap | S_parent | Sequence | T10C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-4 | Person_evidence | WBPerson160 | |||||
| Sequence_name | T10C6.11 | ||||||||
| Molecular_name | T10C6.11 | ||||||||
| T10C6.11.1 | |||||||||
| CE10538 | |||||||||
| Other_name | CELE_T10C6.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | his-4 | ||||||||
| DB_info | Database | AceView | gene | 5Q520 | |||||
| WormQTL | gene | WBGene00001878 | |||||||
| WormFlux | gene | WBGene00001878 | |||||||
| NDB | locus_tag | CELE_T10C6.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001878|UniProtKB=Q27894 | |||||||
| family | PTHR23428 | ||||||||
| NCBI | gene | 180072 | |||||||
| RefSeq | protein | NM_074630.5 | |||||||
| SwissProt | UniProtAcc | Q27894 | |||||||
| UniProt_GCRP | UniProtAcc | Q27894 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele (19) | |||||||||
| Legacy_information | [C.elegansII] NMK. Histone type H2B, HIS1 cluster. [Roberts et al. 1989; EM] | ||||||||
| In_cluster | HIS1_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (161) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Concise_description | his-4 encodes an H2B histone. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. Is an ortholog of several human genes including H2BC3 (H2B clustered histone 3); H2BC5 (H2B clustered histone 5); and H2BC8 (H2B clustered histone 8). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10C6.11 | |||||||
| Corresponding_CDS_history | T10C6.11:wp229 | ||||||||
| Corresponding_transcript | T10C6.11.1 | ||||||||
| Other_sequence | EY459661.1 | ||||||||
| DAC01755_1 | |||||||||
| DA01284 | |||||||||
| RSC01664_1 | |||||||||
| Name_isotig04738 | |||||||||
| TVC01350_1 | |||||||||
| DA01283 | |||||||||
| ACC06568_1 | |||||||||
| TV00274 | |||||||||
| RS10407 | |||||||||
| Associated_feature | WBsf653469 | ||||||||
| WBsf653470 | |||||||||
| WBsf669785 | |||||||||
| WBsf669786 | |||||||||
| WBsf669787 | |||||||||
| WBsf982062 | |||||||||
| WBsf235107 | |||||||||
| Experimental_info | RNAi_result (32) | ||||||||
| Expr_pattern | Chronogram37 | ||||||||
| Expr6658 | |||||||||
| Expr1031106 | |||||||||
| Expr1156625 | |||||||||
| Expr2012463 | |||||||||
| Expr2030701 | |||||||||
| Drives_construct | WBCnstr00003705 | ||||||||
| WBCnstr00036633 | |||||||||
| Construct_product | WBCnstr00021175 | ||||||||
| WBCnstr00036633 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (209) | |||||||||
| Map_info | Map | V | Position | 9.37822 | |||||
| Positive | Positive_clone | T10C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001150 | ||||||||
| WBPaper00005142 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | is NOT an H4 gene | ||||||||
| T10C6.b appears to have become T10C6.11 [sdm 000920] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
