WormBase Tree Display for Gene: WBGene00001569
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WBGene00001569 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F52D2 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | meg-3 | Person_evidence | WBPerson261 | |||||
WBPerson9884 | |||||||||
WBPerson575 | |||||||||
Sequence_name | F52D2.4 | ||||||||
Molecular_name | F52D2.4 | ||||||||
F52D2.4.1 | |||||||||
CE23757 | |||||||||
Other_name | gei-12 | Person_evidence | WBPerson1796 | ||||||
CELE_F52D2.4 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | meg-3 | ||||||||
DB_info | Database | AceView | gene | XC606 | |||||
WormQTL | gene | WBGene00001569 | |||||||
WormFlux | gene | WBGene00001569 | |||||||
NDB | locus_tag | CELE_F52D2.4 | |||||||
NCBI | gene | 180510 | |||||||
RefSeq | protein | NM_075966.6 | |||||||
TREEFAM | TREEFAM_ID | TF322203 | |||||||
TrEMBL | UniProtAcc | Q9TXM1 | |||||||
UniProt_GCRP | UniProtAcc | Q9TXM1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 15 Aug 2014 16:05:09 | WBPerson2970 | Name_change | CGC_name | meg-3 | ||||
Other_name | gei-12 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | meg | ||||||||
Allele (59) | |||||||||
Strain (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog | chrX_pilon.g18541 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog (3) | |||||||||
Structured_description | Concise_description | meg-3 encodes a novel protein that affects embryonic viability and development of the hypodermis; MEG-3 interacts with GEX-3 in yeast two-hybrid assays, and is expressed in all somatic cells. | Paper_evidence | WBPaper00005194 | |||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 30 Jan 2015 00:00:00 | ||||||||
Automated_description | Involved in embryo development; gamete generation; and organelle localization. Located in P granule. Expressed in several structures, including germ cell and oocyte. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F52D2.4 | |||||||
Corresponding_transcript | F52D2.4.1 | ||||||||
Associated_feature | WBsf653716 | ||||||||
WBsf1004196 | |||||||||
WBsf1022389 | |||||||||
WBsf237042 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024287 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00047973 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061662 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015403 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032611 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr2089 | ||||||||
Expr12114 | |||||||||
Expr12116 | |||||||||
Expr1030938 | |||||||||
Expr1151789 | |||||||||
Expr2013510 | |||||||||
Expr2031744 | |||||||||
Drives_construct | WBCnstr00021878 | ||||||||
WBCnstr00037968 | |||||||||
Construct_product | WBCnstr00021878 | ||||||||
WBCnstr00022631 | |||||||||
WBCnstr00037968 | |||||||||
WBCnstr00040205 | |||||||||
Regulate_expr_cluster | WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated | ||||||||
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated | |||||||||
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets | |||||||||
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets | |||||||||
WBPaper00057162:meg-3_meg-4_downregulated_sRNA | |||||||||
WBPaper00057162:meg-3_meg-4_upregulated_sRNA | |||||||||
WBPaper00059174:MEG-3_interacting | |||||||||
Antibody | WBAntibody00002617 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (223) | |||||||||
Interaction (100) | |||||||||
Map_info | Map | X | Position | -17.0968 | Error | 0.017536 | |||
Positive | Positive_clone | F52D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (24) | |||||||||
Remark | Sequence connection from [Qadota H, Kaibuchi K] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |