WormBase Tree Display for Gene: WBGene00001335
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| WBGene00001335 | Evidence | Author_evidence | van der Bliek A | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F35A5 | ||||||
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F35A5.8 | |||||||
| Molecular_name | F35A5.8a | ||||||||
| F35A5.8a.1 | |||||||||
| CE04492 | |||||||||
| F35A5.8b | |||||||||
| CE29787 | |||||||||
| F35A5.8c | |||||||||
| CE48145 | |||||||||
| F35A5.8a.2 | |||||||||
| F35A5.8b.1 | |||||||||
| F35A5.8c.1 | |||||||||
| Other_name | erp-1 | Person_evidence | WBPerson733 | ||||||
| CELE_F35A5.8 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | F35A5.8 | ||||||||
| DB_info | Database | AceView | gene | XE420 | |||||
| WormQTL | gene | WBGene00001335 | |||||||
| WormFlux | gene | WBGene00001335 | |||||||
| NDB | locus_tag | CELE_F35A5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001335|UniProtKB=Q20005 | |||||||
| family | PTHR14167 | ||||||||
| NCBI | gene | 180667 | |||||||
| RefSeq | protein | NM_171658.5 | |||||||
| NM_171657.8 | |||||||||
| NM_001277025.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF313281 | |||||||
| TrEMBL | UniProtAcc | L8E817 | |||||||
| Q20005 | |||||||||
| Q8WT52 | |||||||||
| UniProt_GCRP | UniProtAcc | Q20005 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 03 Apr 2017 15:18:44 | WBPerson2970 | Name_change | Other_name | erp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| Strain | WBStrain00001424 | ||||||||
| WBStrain00002168 | |||||||||
| WBStrain00031437 | |||||||||
| WBStrain00031438 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022989 | ||||||||
| 00022990 | |||||||||
| 00103355 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00006791 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00012891 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015128 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | erp-1 is homologous to the human gene endophilin B1 (also called SH3GLB1, for SH3 domain GRB2-like endophilin B1). | Paper_evidence | WBPaper00012842 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in membrane organization. Predicted to be located in membrane. Is an ortholog of human SH3GLB2 (SH3 domain containing GRB2 like, endophilin B2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
| Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35A5.8a | |||||||
| F35A5.8b | |||||||||
| F35A5.8c | |||||||||
| Corresponding_transcript | F35A5.8a.1 | ||||||||
| F35A5.8a.2 | |||||||||
| F35A5.8b.1 | |||||||||
| F35A5.8c.1 | |||||||||
| Other_sequence (51) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00080554 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00098494 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046269 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060885 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060886 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060884 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram159 | ||||||||
| Chronogram1441 | |||||||||
| Expr3567 | |||||||||
| Expr5947 | |||||||||
| Expr5948 | |||||||||
| Expr1020865 | |||||||||
| Expr1030815 | |||||||||
| Expr1150159 | |||||||||
| Expr2003293 | |||||||||
| Expr2021506 | |||||||||
| Drives_construct | WBCnstr00002308 | ||||||||
| WBCnstr00004302 | |||||||||
| WBCnstr00036993 | |||||||||
| Construct_product | WBCnstr00007776 | ||||||||
| WBCnstr00011491 | |||||||||
| WBCnstr00036993 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction | WBInteraction000167134 | ||||||||
| WBInteraction000169204 | |||||||||
| WBInteraction000172855 | |||||||||
| WBInteraction000543981 | |||||||||
| WBInteraction000544738 | |||||||||
| WBInteraction000546037 | |||||||||
| WBInteraction000546038 | |||||||||
| WBInteraction000575367 | |||||||||
| WBInteraction000583652 | |||||||||
| WBInteraction000584012 | |||||||||
| Map_info | Map | X | Position | -9.37968 | Error | 0.022429 | |||
| Positive | Positive_clone | F35A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4205 | |||||||
| 4291 | |||||||||
| 4310 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012842 | ||||||||
| WBPaper00024031 | |||||||||
| WBPaper00024200 | |||||||||
| WBPaper00025957 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048489 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Previously known as erp-1. The erp gene class has been reassigned. | |||||||||
| Method | Gene |
