WormBase Tree Display for Gene: WBGene00001245
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WBGene00001245 | SMap | S_parent | Sequence | F56H11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | elo-7 | Person_evidence | WBPerson79 | |||||
Sequence_name | F56H11.3 | ||||||||
Molecular_name | F56H11.3 | ||||||||
F56H11.3.1 | |||||||||
CE35559 | |||||||||
Other_name | CELE_F56H11.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | elo-7 | ||||||||
DB_info | Database | AceView | gene | 4K293 | |||||
WormQTL | gene | WBGene00001245 | |||||||
WormFlux | gene | WBGene00001245 | |||||||
NDB | locus_tag | CELE_F56H11.3 | |||||||
Panther | gene | CAEEL|EnsemblGenome=WBGene00001245|UniProtKB=Q20904 | |||||||
family | PTHR11157 | ||||||||
NCBI | gene | 186426 | |||||||
RefSeq | protein | NM_001268468.2 | |||||||
TrEMBL | UniProtAcc | Q20904 | |||||||
UniProt_GCRP | UniProtAcc | Q20904 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | elo | ||||||||
Allele (23) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (18) | |||||||||
Ortholog (44) | |||||||||
Paralog | WBGene00001239 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00001240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001241 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001242 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001243 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001244 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001247 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001246 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
Structured_description | Concise_description | The elo-7 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-7 has no known function in vivo. | Paper_evidence | WBPaper00004162 | |||||
WBPaper00005728 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56H11.3 | |||||||
Corresponding_CDS_history | F56H11.3:wp109 | ||||||||
F56H11.3b:wp246 | |||||||||
Corresponding_transcript | F56H11.3.1 | ||||||||
Other_sequence | OVC02819_1 | ||||||||
BF154352.1 | |||||||||
CJC03150_1 | |||||||||
Experimental_info | RNAi_result | WBRNAi00048775 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00114844 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102639 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022963 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015850 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00095254 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00114850 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032986 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014339 | ||||||||
Expr1152524 | |||||||||
Expr2011284 | |||||||||
Expr2029520 | |||||||||
Drives_construct | WBCnstr00037014 | ||||||||
Construct_product | WBCnstr00037014 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (137) | |||||||||
Interaction (145) | |||||||||
Map_info | Map | IV | Position | 4.29744 | Error | 0.002574 | |||
Positive | Positive_clone | F56H11 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024532 | ||||||||
WBPaper00029292 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064105 | |||||||||
WBPaper00065988 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |