WormBase Tree Display for Gene: WBGene00000774
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| WBGene00000774 | Evidence | Person_evidence | WBPerson71 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson395 | |||||||||
| SMap | S_parent | Sequence | F56A8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | cpf-2 | Person_evidence | WBPerson71 | |||||
| Sequence_name | F56A8.6 | ||||||||
| Molecular_name | F56A8.6 | ||||||||
| F56A8.6.1 | |||||||||
| CE16126 | |||||||||
| Other_name | CELE_F56A8.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cpf-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpf | ||||||||
| Allele (28) | |||||||||
| Possibly_affected_by | WBVar02158937 | ||||||||
| Strain | WBStrain00049358 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036334 | ||||||||
| 00036335 | |||||||||
| 00036336 | |||||||||
| 00036337 | |||||||||
| 00036338 | |||||||||
| 00036339 | |||||||||
| 00036340 | |||||||||
| 00111845 | |||||||||
| 00111846 | |||||||||
| 00111847 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00011155 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00011059 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011156 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00006697 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016245 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in mRNA 3'-end processing. Located in nuclear speck. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability. Is an ortholog of human CSTF2 (cleavage stimulation factor subunit 2) and CSTF2T (cleavage stimulation factor subunit 2 tau variant). | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050776 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2484) | ||||
| Molecular_info | Corresponding_CDS | F56A8.6 | |||||||
| Corresponding_transcript | F56A8.6.1 | ||||||||
| Other_sequence (52) | |||||||||
| Associated_feature | WBsf651568 | ||||||||
| WBsf716761 | |||||||||
| WBsf718013 | |||||||||
| WBsf994846 | |||||||||
| WBsf227722 | |||||||||
| WBsf227723 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr1026988 | ||||||||
| Expr1030478 | |||||||||
| Expr1152391 | |||||||||
| Expr2010481 | |||||||||
| Expr2028721 | |||||||||
| Drives_construct | WBCnstr00037287 | ||||||||
| Construct_product | WBCnstr00037287 | ||||||||
| Antibody | WBAntibody00000415 | ||||||||
| WBAntibody00002701 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction (165) | |||||||||
| Map_info | Map | III | Position | 21.1667 | Error | 0.013483 | |||
| Positive | Positive_clone | F56A8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
