WormBase Tree Display for Gene: WBGene00000726
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| WBGene00000726 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F17C11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-153 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F17C11.3 | ||||||||
| Molecular_name | F17C11.3 | ||||||||
| F17C11.3.1 | |||||||||
| CE05650 | |||||||||
| Other_name | CELE_F17C11.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | col-153 | ||||||||
| DB_info | Database | AceView | gene | 5L431 | |||||
| WormQTL | gene | WBGene00000726 | |||||||
| WormFlux | gene | WBGene00000726 | |||||||
| NDB | locus_tag | CELE_F17C11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000726|UniProtKB=Q19514 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 179517 | |||||||
| RefSeq | protein | NM_073392.7 | |||||||
| TREEFAM | TREEFAM_ID | TF319192 | |||||||
| TrEMBL | UniProtAcc | Q19514 | |||||||
| UniProt_GCRP | UniProtAcc | Q19514 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067298 | ||||||||
| 00067299 | |||||||||
| 00111782 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17C11.3 | |||||||
| Corresponding_transcript | F17C11.3.1 | ||||||||
| Other_sequence | CSC00659_1 | ||||||||
| Tcir_isotig09755 | |||||||||
| FD516647.1 | |||||||||
| Associated_feature | WBsf647216 | ||||||||
| WBsf647217 | |||||||||
| WBsf661065 | |||||||||
| WBsf661668 | |||||||||
| WBsf661669 | |||||||||
| WBsf022563 | |||||||||
| WBsf232439 | |||||||||
| WBsf232440 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044875 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013458 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010932 | ||||||||
| Expr1030442 | |||||||||
| Expr1148841 | |||||||||
| Expr2010348 | |||||||||
| Expr2028591 | |||||||||
| Drives_construct | WBCnstr00037332 | ||||||||
| Construct_product | WBCnstr00037332 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (188) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | V | Position | 2.838 | |||||
| Positive | Positive_clone | F17C11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (2.83553) | |||||||||
| Method | Gene |
