WormBase Tree Display for Gene: WBGene00000680
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WBGene00000680 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | Y77E11A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-106 | Person_evidence | WBPerson345 | |||||
Sequence_name | Y77E11A.15 | ||||||||
Molecular_name | Y77E11A.15 | ||||||||
Y77E11A.15.1 | |||||||||
CE26306 | |||||||||
Other_name | CELE_Y77E11A.15 | Accession_evidence | NDB | BX284604 | |||||
Public_name | col-106 | ||||||||
DB_info | Database | AceView | gene | 4C224 | |||||
WormQTL | gene | WBGene00000680 | |||||||
WormFlux | gene | WBGene00000680 | |||||||
NDB | locus_tag | CELE_Y77E11A.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000680|UniProtKB=Q8MXT6 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 176955 | |||||||
RefSeq | protein | NM_171268.7 | |||||||
TREEFAM | TREEFAM_ID | TF319043 | |||||||
TrEMBL | UniProtAcc | Q8MXT6 | |||||||
UniProt_GCRP | UniProtAcc | Q8MXT6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00080455 | ||||||||
00102447 | |||||||||
Ortholog (26) | |||||||||
Paralog (161) | |||||||||
Structured_description | Concise_description | col-106 encodes a predicted cuticular collagen. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 16 Aug 2011 00:00:00 | ||||||||
Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y77E11A.15 | |||||||
Corresponding_transcript | Y77E11A.15.1 | ||||||||
Other_sequence (11) | |||||||||
Associated_feature | WBsf229768 | ||||||||
Experimental_info | RNAi_result | WBRNAi00021488 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021485 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000952 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058512 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033387 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017135 | ||||||||
Expr1030404 | |||||||||
Expr1161920 | |||||||||
Expr2028547 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (253) | |||||||||
Interaction | WBInteraction000029863 | ||||||||
WBInteraction000513249 | |||||||||
WBInteraction000552018 | |||||||||
WBInteraction000559921 | |||||||||
WBInteraction000582912 | |||||||||
WBInteraction000585782 | |||||||||
Map_info | Map | IV | Position | -18.6769 | Error | 0.092775 | |||
Positive | Positive_clone | Y77E11A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00062518 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |