WormBase Tree Display for Gene: WBGene00000534
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WBGene00000534 | SMap | S_parent | Sequence | R01B10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cpi-2 | Paper_evidence | WBPaper00026724 | |||||
WBPaper00005846 | |||||||||
WBPaper00024997 | |||||||||
Person_evidence | WBPerson4368 | ||||||||
WBPerson390 | |||||||||
Sequence_name | R01B10.1 | ||||||||
Molecular_name | R01B10.1a | ||||||||
R01B10.1a.1 | |||||||||
CE25962 | |||||||||
R01B10.1b | |||||||||
Other_name | cli-1 | ||||||||
CELE_R01B10.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | cpi-2 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 04 Jan 2006 11:04:12 | WBPerson2970 | Name_change | CGC_name | cpi-2 | ||||
Other_name | cli-1 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cpi | ||||||||
Allele (30) | |||||||||
Strain | WBStrain00031908 | ||||||||
WBStrain00054915 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (48) | |||||||||
Paralog | WBGene00000535 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00016523 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00023486 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enables cysteine-type endopeptidase inhibitor activity. Involved in positive regulation of vitellogenesis; regulation of oocyte development; and regulation of protein processing. Located in extracellular space and yolk granule. Expressed in hypodermis; pharyngeal gland cell; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; CST3-related cerebral amyloid angiopathy; artery disease (multiple); and autoimmune disease of the nervous system (multiple). Is an ortholog of several human genes including CST1 (cystatin SN); CST2 (cystatin SA); and CST3 (cystatin C). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model (17) | ||||||||
Molecular_info | Corresponding_CDS | R01B10.1a | |||||||
Corresponding_transcript | R01B10.1b | ||||||||
R01B10.1a.1 | |||||||||
Other_sequence (85) | |||||||||
Associated_feature | WBsf028073 | ||||||||
WBsf646851 | |||||||||
WBsf655095 | |||||||||
WBsf661303 | |||||||||
WBsf661304 | |||||||||
WBsf661305 | |||||||||
WBsf1000163 | |||||||||
WBsf231832 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr3711 | ||||||||
Expr7868 | |||||||||
Expr7869 | |||||||||
Expr1020802 | |||||||||
Expr1030320 | |||||||||
Expr1154795 | |||||||||
Expr2010490 | |||||||||
Expr2028730 | |||||||||
Drives_construct | WBCnstr00012962 | ||||||||
Construct_product | WBCnstr00012962 | ||||||||
Antibody | WBAntibody00001122 | ||||||||
Microarray_results (31) | |||||||||
Expression_cluster (139) | |||||||||
Interaction | WBInteraction000143932 | ||||||||
WBInteraction000306622 | |||||||||
WBInteraction000552020 | |||||||||
WBInteraction000577508 | |||||||||
Map_info | Map | V | Position | -0.400385 | Error | 0.008156 | |||
Positive | Positive_clone | R01B10 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4964 | |||||||
4240 | |||||||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Sequence connection from [Hashmi S, Lustigan S], [krb 020711] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |