WormBase Tree Display for Gene: WBGene00000174
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WBGene00000174 | Evidence | Person_evidence | WBPerson548 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C32C4 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | aqp-6 | Person_evidence | WBPerson300 | |||||
Sequence_name | C32C4.2 | ||||||||
Molecular_name | C32C4.2a | ||||||||
C32C4.2a.1 | |||||||||
CE05345 | |||||||||
C32C4.2b | |||||||||
CE44791 | |||||||||
C32C4.2c | |||||||||
CE47018 | |||||||||
C32C4.2b.1 | |||||||||
C32C4.2c.1 | |||||||||
Other_name | CELE_C32C4.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | aqp-6 | ||||||||
DB_info | Database | AceView | gene | 5L131 | |||||
WormQTL | gene | WBGene00000174 | |||||||
WormFlux | gene | WBGene00000174 | |||||||
NDB | locus_tag | CELE_C32C4.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000174|UniProtKB=H2FLH4 | |||||||
family | PTHR45687 | ||||||||
NCBI | gene | 183121 | |||||||
RefSeq | protein | NM_001269317.4 | |||||||
NM_001269319.3 | |||||||||
NM_001269316.4 | |||||||||
TrEMBL | UniProtAcc | H2FLH4 | |||||||
Q18352 | |||||||||
D5MCS1 | |||||||||
UniProt_GCRP | UniProtAcc | H2FLH4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 28 Nov 2011 09:42:34 | WBPerson4025 | Event | Acquires_merge | WBGene00194781 | ||||
Acquires_merge | WBGene00194781 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | aqp | ||||||||
Allele (52) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (37) | |||||||||
Paralog | WBGene00000172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00000173 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00000169 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000170 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00000176 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | apq-6 encodes an aquaporin whose expression in Xenopus oocytes increases water permeability five- to seven-fold; AQP-6 is expressed in the cilia and cell bodies of IL1 sensory neurons; AQP-6 is orthologous to human AQP8 (OMIM:603750). | Paper_evidence | WBPaper00029039 | |||||
WBPaper00030907 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 21 Nov 2011 00:00:00 | ||||||||
Automated_description | Enables water channel activity. Involved in water transport. Located in neuronal cell body and non-motile cilium. Expressed in IL1 neuron. Is an ortholog of human AQP8 (aquaporin 8). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C32C4.2a | |||||||
C32C4.2b | |||||||||
C32C4.2c | |||||||||
Corresponding_CDS_history | C32C4.2d:wp261 | ||||||||
Corresponding_transcript | C32C4.2a.1 | ||||||||
C32C4.2b.1 | |||||||||
C32C4.2c.1 | |||||||||
Other_sequence (16) | |||||||||
Associated_feature | WBsf1001157 | ||||||||
Experimental_info | RNAi_result | WBRNAi00029409 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011472 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041660 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4776 | ||||||||
Expr1011216 | |||||||||
Expr1145683 | |||||||||
Expr2009383 | |||||||||
Expr2027619 | |||||||||
Drives_construct | WBCnstr00012236 | ||||||||
WBCnstr00037686 | |||||||||
WBCnstr00040527 | |||||||||
Construct_product | WBCnstr00037686 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (125) | |||||||||
SAGE_tag | SAGE:gaggaacactcctgctg | Strand | Antisense | ||||||
SAGE:ccgtctgctatgtggtc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:ccgtctgcta | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (44) | |||||||||
Map_info | Map | V | Position | 2.67018 | Error | 0.002544 | |||
Positive | Positive_clone | C32C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00029039 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |