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WormBase Tree Display for Gene: WBGene00031618

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Name Class

WBGene00031618SMapS_parentSequencecb25.fpc2234
IdentityVersion4
NameCGC_nameCbr-rnh-1.0From_analysisInferred_from_orthology
Sequence_nameCBG10155
Molecular_nameCBG10155a
CBG10155a.1
CBP16719
CBG10155b
CBP41504
CBG10155b.1
Other_nameCBG_10155Accession_evidenceNDBHE601459
Cbr-rnh-1.0.1From_analysisInferred_from_orthology
Public_nameCbr-rnh-1.0
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:01WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-rnh-1.0
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCbr-rnh-1.0.1
Other_nameCbr-rnh-1.0
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameCbr-rnh-1.0
Other_nameCbr-rnh-1.0.1
528 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-rnh-1.0.1
Other_nameCbr-rnh-1.0
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-rnh-1.0
Other_nameCbr-rnh-1.0.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrnh
RNASeq_FPKMWBls:000000221.5308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
39.1782From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.8563From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
56.1476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
39.2081From_analysisRNASeq.briggsae.WBls:0000002.control_mean
39.2978From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
39.577From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000375.482From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
77.9352From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
80.3883From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
67.801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
74.5571From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000432.1351From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
36.9417From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
41.7484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
33.2828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
38.1974From_analysisRNASeq.briggsae.WBls:0000004.control_mean
40.2383From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
43.5824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:000002425.91From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
25.9741From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
26.7125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
26.9508From_analysisRNASeq.briggsae.WBls:0000024.control_median
27.9274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
28.5496From_analysisRNASeq.briggsae.WBls:0000024.control_mean
34.3868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
34.6982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
41.2897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
40.816From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
48.6369From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
54.6683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:00000271.06139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
15.0115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.46263From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.51184From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.7371From_analysisRNASeq.briggsae.WBls:0000027.control_median
10.7941From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.6409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003525.4721From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.7498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
20.5815From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
23.8915From_analysisRNASeq.briggsae.WBls:0000038.control_median
25.1715From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.2014From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
36.1533From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004129.1646From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
46.7195From_analysisRNASeq.briggsae.WBls:0000041.control_mean
50.9044From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
51.5676From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.2309From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
54.5779From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
39.8793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
42.2022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
44.8265From_analysisRNASeq.briggsae.WBls:0000041.control_mean
46.5533From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006330.4949From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
32.8307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
36.2777From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
36.3981From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
40.9171From_analysisRNASeq.briggsae.WBls:0000063.control_mean
68.5841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
36.3379From_analysisRNASeq.briggsae.WBls:0000063.control_median
41.6212From_analysisRNASeq.briggsae.WBls:0000063.control_mean
45.1415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010132.1351From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.5394From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
35.2701From_analysisRNASeq.briggsae.total_over_all_stages.control_median
36.1503From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129890
00129891
00129892
Ortholog (32)
ParalogWBGene00028409Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00033883Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039570Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA-DNA hybrid ribonuclease activity; magnesium ion binding activity; and nucleic acid binding activity. Is an ortholog of C. elegans rnh-1.0.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG10155a
CBG10155b
Corresponding_CDS_historyCBG10155:bp194
Corresponding_transcriptCBG10155a.1
CBG10155b.1
Other_sequence (19)
Experimental_infoExpr_patternExpr1058841
Microarray_resultsGPL8303_CB6_WBGene00031618_A
GPL8303_CB6_WBGene00031618_B
GPL14143_CBG10155_388-447_0.864_30_C
GPL14143_CBG10155_627-686_0.941_1_B
GPL14143_CBG10155_741-800_0.936_3_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_upregulated
ReferenceWBPaper00027023
MethodGene