WormBase Tree Display for Gene: WBGene00012166
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| WBGene00012166 | SMap | S_parent | Sequence | W01A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nuo-6 | Paper_evidence | WBPaper00036109 | |||||
| Person_evidence | WBPerson364 | ||||||||
| Sequence_name | W01A8.4 | ||||||||
| Molecular_name | W01A8.4 | ||||||||
| W01A8.4.1 | |||||||||
| CE32507 | |||||||||
| Other_name | ndub-4 | Person_evidence | WBPerson555 | ||||||
| CELE_W01A8.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nuo-6 | ||||||||
| DB_info | Database | AceView | gene | 1H644 | |||||
| WormQTL | gene | WBGene00012166 | |||||||
| WormFlux | gene | WBGene00012166 | |||||||
| NDB | locus_tag | CELE_W01A8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012166|UniProtKB=Q23098 | |||||||
| family | PTHR15469 | ||||||||
| NCBI | gene | 172438 | |||||||
| RefSeq | protein | NM_059600.6 | |||||||
| TREEFAM | TREEFAM_ID | TF353901 | |||||||
| TrEMBL | UniProtAcc | Q23098 | |||||||
| UniProt_GCRP | UniProtAcc | Q23098 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Jul 2010 13:18:30 | WBPerson2970 | Name_change | CGC_name | nuo-6 | ||||
| 3 | 16 Jan 2023 18:37:21 | WBPerson51134 | Name_change | Other_name | ndub-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nuo | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00026676 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00080074 | ||||||||
| 00080075 | |||||||||
| 00080076 | |||||||||
| 00080077 | |||||||||
| 00080078 | |||||||||
| 00080079 | |||||||||
| 00123309 | |||||||||
| Ortholog (42) | |||||||||
| Structured_description | Concise_description | nuo-6 encodes the C. elegans ortholog of the NDUFB4/B15 subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). | Paper_evidence | WBPaper00036109 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Mar 2013 00:00:00 | ||||||||
| Automated_description | Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex I. Expressed in body wall musculature; germ line; gonad; and hypodermis. Is an ortholog of human NDUFB4 (NADH:ubiquinone oxidoreductase subunit B4). | Paper_evidence | WBPaper00065943 | ||||||
| WBPaper00067038 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS296 version of WormBase | ||||||||
| Date_last_updated | 20 Mar 2025 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W01A8.4 | |||||||
| Corresponding_CDS_history | W01A8.4:wp90 | ||||||||
| Corresponding_transcript | W01A8.4.1 | ||||||||
| Other_sequence (89) | |||||||||
| Associated_feature | WBsf649280 | ||||||||
| WBsf219672 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr9086 | ||||||||
| Expr1016520 | |||||||||
| Expr1035381 | |||||||||
| Expr1158040 | |||||||||
| Expr2014532 | |||||||||
| Expr2032771 | |||||||||
| Drives_construct | WBCnstr00013711 | ||||||||
| WBCnstr00030096 | |||||||||
| Construct_product | WBCnstr00013711 | ||||||||
| WBCnstr00030096 | |||||||||
| Regulate_expr_cluster | WBPaper00045263:nuo-6(qm200)_downregulated | ||||||||
| WBPaper00045263:nuo-6(qm200)_upregulated | |||||||||
| WBPaper00045263:ProLongevity-mtROS_downregulated | |||||||||
| WBPaper00045263:ProLongevity-mtROS_upregulated | |||||||||
| WBPaper00053810:nuo-6(qm200)_downregulated | |||||||||
| WBPaper00053810:nuo-6(qm200)_upregulated | |||||||||
| WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_downregulated | |||||||||
| WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated | |||||||||
| WBPaper00055941:nuo-6(qm200)_downregulated | |||||||||
| WBPaper00055941:nuo-6(qm200)_upregulated | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (70) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| Map_info | Map | I | Position | 1.69904 | Error | 0.003103 | |||
| Positive | Positive_clone | W01A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031805 | ||||||||
| WBPaper00036109 | |||||||||
| WBPaper00037874 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039052 | |||||||||
| WBPaper00040135 | |||||||||
| WBPaper00041750 | |||||||||
| WBPaper00042217 | |||||||||
| WBPaper00044938 | |||||||||
| WBPaper00045076 | |||||||||
| WBPaper00045263 | |||||||||
| WBPaper00046210 | |||||||||
| WBPaper00046533 | |||||||||
| WBPaper00047114 | |||||||||
| WBPaper00047630 | |||||||||
| WBPaper00048163 | |||||||||
| WBPaper00049659 | |||||||||
| WBPaper00050325 | |||||||||
| WBPaper00050340 | |||||||||
| WBPaper00051263 | |||||||||
| WBPaper00051708 | |||||||||
| WBPaper00051771 | |||||||||
| WBPaper00053073 | |||||||||
| WBPaper00053810 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055941 | |||||||||
| WBPaper00057218 | |||||||||
| WBPaper00058699 | |||||||||
| WBPaper00059817 | |||||||||
| WBPaper00060692 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00062625 | |||||||||
| WBPaper00062787 | |||||||||
| WBPaper00062806 | |||||||||
| WBPaper00063897 | |||||||||
| WBPaper00063971 | |||||||||
| WBPaper00063976 | |||||||||
| WBPaper00064067 | |||||||||
| WBPaper00064518 | |||||||||
| WBPaper00064716 | |||||||||
| WBPaper00064868 | |||||||||
| WBPaper00065556 | |||||||||
| WBPaper00065666 | |||||||||
| WBPaper00065779 | |||||||||
| WBPaper00066378 | |||||||||
| WBPaper00066405 | |||||||||
| WBPaper00067549 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
