WormBase Tree Display for Gene: WBGene00113305

WBGene00113305 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 7
    Name: CGC_name: Ppa-lgc-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA23751
      Molecular_name: PPA23751
        PPA23751.1
        PP60186
      Other_name: GENEPREDICTION_SNAP300000080637
        GENEPREDICTION_SNAP300000080651
        GENEPREDICTION_SNAP300000080652
        UMM-S57-4.1 Person_evidence: WBPerson606
      Public_name: Ppa-lgc-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113319
        3 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113320
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-lgc-4
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-lgc-4
      Acquires_merge: WBGene00113319
        WBGene00113320
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000032 6.3356 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.06884 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        2.46815 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00178782
      00178783
      00178784
      00178785
      00178786
      00178787
      00178788
    Ortholog (27)
    Paralog: WBGene00089598 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00089887 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090048 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090600 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091469 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091715 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091902 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092487 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092568 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092927 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092981 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093398 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093507 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093530 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094886 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095232 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095523 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095561 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096180 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096314 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096737 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097397 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099077 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099079 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099222 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099957 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100028 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100131 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100149 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100788 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101436 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101775 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102150 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102369 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102482 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103120 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103670 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104997 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105130 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105387 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105475 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105945 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106281 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106840 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106841 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107167 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107421 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107500 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107864 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107966 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108006 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108406 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109103 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109238 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109439 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109732 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110178 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110842 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111295 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111807 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112012 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113472 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113693 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114665 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114769 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115250 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115536 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116165 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116273 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116652 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116671 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117414 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118382 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118813 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119089 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119191 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204046 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272915 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273181 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274031 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274324 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274759 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276039 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276047 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276280 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277073 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277591 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277660 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278203 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278589 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279258 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279750 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279938 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280196 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280443 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280697 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00284058 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304838 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305140 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305149 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity; symporter activity; and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: PPA23751
    Corresponding_transcript: PPA23751.1
    Other_sequence (44)
  Experimental_info: Microarray_results (13)
  Remark: [190208 pad] The CGC name Ppa-lgc-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-lgc-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene