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WormBase Tree Display for Gene: WBGene00239977

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Name Class

WBGene00239977SMapS_parentSequenceOVOC_OM1b_125
IdentityVersion1
NameSequence_nameOVOC3168
Molecular_nameOVOC3168
OVOC3168.1
OVP01319
Public_nameOVOC3168
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010148.0999From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
84.6851From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:0000107120.6From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108113.333From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
277.934From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
28.6391From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
33.4267From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006640.062768From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.174786From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.286804From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00228304Brugia malayiFrom_analysisWormBase-Compara
Pan_g927Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00090010Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111475Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00289987Trichuris murisFrom_analysisWormBase-Compara
WBGene00297465Trichuris murisFrom_analysisWormBase-Compara
Paralog (52)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Collagen triple helix repeat (20 copies) and Collagen triple helix repeat. Is an ortholog of B. malayi Bm8043.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSOVOC3168
Corresponding_transcriptOVOC3168.1
Other_sequenceAA736337.1
AI130090.1
AI130621.1
AI444845.1
BF718868.1
OVC00456_1
HG07814
CJC00721_1
OOC02286_1
EX007473.1
GW412208.1
CRC07012_1
Dviv_isotig26267
Dviv_isotig25926
Oden_isotig22030
BMC06865_1
HG02519
MAC03126_1
HCC01183_1
TDC00115_1
ES741416.1
DVC03460_1
ASC00188_1
ES411878.1
PSC01684_1
ES744317.1
EB747532.1
DN190902.1
GO240667.1
Tcol_isotig20840
EX915318.1
CR08952
CR11070
EX914118.1
EX911127.1
Oden_isotig20765
FF681956.1
TX00555
HC03076
EV851499.1
EX913427.1
Oden_isotig21473
EX542482.1
CBC01123_1
MC01534
AYC00011_1
EX915519.1
EX007548.1
BXC06423_1
FK800128.1
HG07493
EX550172.1
EX913734.1
HG03518
EX009171.1
EX549241.1
AAC00463_1
HGC02878_1
ACC15252_1
ES411892.1
JI467023.1
AM744792.1
ES743199.1
AS01805
ES743499.1
ES743532.1
Dviv_isotig25718
FG974195.1
EX913185.1
EX538680.1
EX913998.1
ES740979.1
AS08518
HG00053
BM01203
HG11742
EX549245.1
FK802472.1
EX013004.1
TCC00632_1
HBC04913_1
ES741218.1
EX542981.1
EX538684.1
JI176652.1
EX013722.1
MethodGene