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WormBase Tree Display for Gene: WBGene00267557

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Name Class

WBGene00267557SMapS_parentSequenceSRAE_chrX_scaffold3
IdentityVersion1
NameSequence_nameSRAE_X000198000
Molecular_nameSRAE_X000198000
SRAE_X000198000.1
SRP08022
Public_nameSRAE_X000198000
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000677626.881From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
640.253From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
838.484From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
839.945From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
898.678From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
899.12From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:0000678140.005From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
182.195From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
214.62From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
230.488From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
235.897From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
236.018From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
242.215From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
251.713From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
WBls:0000680266.062From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:0000682233.253From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00273095
OrthologWBGene00150453Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158790Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142179Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035711Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037002Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042489Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227801Brugia malayiFrom_analysisWormBase-Compara
WBGene00006584Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006585Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006764Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119505Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120959Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127002Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242556Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00099182Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109023Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272388Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277836Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00056523Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058297Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00070603Caenorhabditis remaneiFrom_analysisWormBase-Compara
CBOVI.g11950Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g3025Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g3615Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11325Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g4785Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g663Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7226Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g7643Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11706Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g16797Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g18766Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g5694Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15824Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g17160Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g19279Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g23558Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10055Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24667Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g24974Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2859Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g4780Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g9622Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11216Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g19859Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g94Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12284Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17964Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28783Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3963Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12626Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g18709Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19331Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00158.g5878Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00239.g7645Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00359.g9706Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-tni-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-tni-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-unc-27Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold31.g131Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold408.g971Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10942Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00049.g2532Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00458.g11645Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00956.g17081Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01127Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_02091Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_02847Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019821Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_023783Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025235Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00394Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07090Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10392Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19272Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50375600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0088400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0172300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17268Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19642Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g20062Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291450Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00266364Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be part of troponin complex. Is an ortholog of C. elegans tni-1; tni-3; and unc-27. In C. elegans, tni-1 is involved in backward locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSSRAE_X000198000
Corresponding_transcriptSRAE_X000198000.1
Other_sequence (192)
Experimental_infoExpression_clusterWBPaper00050919:down_infective-L3_vs_free-living_mRNA
WBPaper00050919:down_parasitic_vs_free-living_mRNA
WBPaper00050919:down_parasitic_vs_free-living_protein
MethodGene