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WormBase Tree Display for Gene: WBGene00242009

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Name Class

WBGene00242009SMapS_parentSequenceOVOC_OM2_57
IdentityVersion2
NameCGC_nameOvo-unc-6From_analysisInferred_from_orthology
Sequence_nameOVOC5200
Molecular_nameOVOC5200
OVOC5200.1
OVP11961
Public_nameOvo-unc-6
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-unc-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001010.55563From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
2.57503From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001078.50854From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001086.50594From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
7.70468From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
7.73786From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
9.00296From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006640.130515From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.137566From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.144617From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00148673Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00032168Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224249Brugia malayiFrom_analysisWormBase-Compara
WBGene00006746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00119812Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3278Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10853Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21093Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15050Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2767Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20643Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9212Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10840Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g375Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10862Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00160.g5922Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05761.g19817Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold570.g4243Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00707.g14621Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00273Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024674Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01017Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4021Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0196500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051410Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113122Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g19321Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266163Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297119Trichuris murisFrom_analysisWormBase-Compara
WBGene00300156Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237056Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240474Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240803Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241569Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242174Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246876Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Laminin EGF domain; Netrin module, non-TIMP type; Tissue inhibitor of metalloproteinases-like, OB-fold; Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin N-terminal (Domain VI); and Laminin-type EGF domain. Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSOVOC5200
Corresponding_transcriptOVOC5200.1
Other_sequence (24)
MethodGene